ENSXMAG00000006715 (Xiphophorus maculatus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSXMAG00000006715 T319519_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.738 0.738
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.738 0.738
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.738 0.738
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.738 0.738
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.738 0.738
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.738 0.738
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.738 0.738
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.738 0.738
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.738 0.738
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.738 0.738
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.738 0.738
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.738 0.738
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.723 0.723
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.723 0.723
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.723 0.723
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.723 0.723
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.723 0.723
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.723 0.723
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.723 0.723
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.723 0.723
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.723 0.723
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.723 0.723
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.723 0.723
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.723 0.723
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.723 0.723
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.723 0.723
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.723 0.723
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.723 0.723
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.723 0.723
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.723 0.723
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.723 0.723
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.723 0.723
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.723 0.723
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.723 0.723
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.723 0.723
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000006725 Runt 42 172

Links

Other Runt family TFs
Other Xiphophorus maculatus TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RUNX3 Homo sapiens ENSG00000020633 D 0.723
RUNX2 Homo sapiens ENSG00000124813 D 0.723
RUNX1 Homo sapiens ENSG00000159216 D 0.738
Runx1 Mus musculus ENSMUSG00000022952 D 0.738
Runx2 Mus musculus ENSMUSG00000039153 D 0.723
Runx3 Mus musculus ENSMUSG00000070691 D 0.723
RUNX2 Anolis carolinensis ENSACAG00000013003 I 0.731
RUNX3 Anolis carolinensis ENSACAG00000017855 I 0.750
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I 0.738
ENSAMEG00000009223 Ailuropoda melanoleuca ENSAMEG00000009223 I 0.767
ENSAMEG00000010102 Ailuropoda melanoleuca ENSAMEG00000010102 I 0.723
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.715
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I 0.723
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I 0.708
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I 0.715
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I 0.737
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I 0.769
ENSAPLG00000016439 Anas platyrhynchos ENSAPLG00000016439 I 0.723
RUNX2 Bos taurus ENSBTAG00000004104 I 0.723
RUNX1 Bos taurus ENSBTAG00000004742 I 0.738
RUNX1 Canis familiaris ENSCAFG00000009596 I 0.738
RUNX3 Canis familiaris ENSCAFG00000012903 I 0.723
ENSCAFG00000031052 Canis familiaris ENSCAFG00000031052 I 0.720
ENSCING00000002253 Ciona intestinalis ENSCING00000002253 I 0.733
RUNX1 Callithrix jacchus ENSCJAG00000002816 I 0.773
RUNX3 Callithrix jacchus ENSCJAG00000020815 I 0.715
ENSCPOG00000000551 Cavia porcellus ENSCPOG00000000551 I 0.723
ENSCPOG00000002684 Cavia porcellus ENSCPOG00000002684 I 0.731
RUNX2 Cavia porcellus ENSCPOG00000005277 I 0.723
ENSCSAG00000000947 Chlorocebus sabaeus ENSCSAG00000000947 I 0.723
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I 0.738
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I 0.723
runx2a Danio rerio ENSDARG00000040261 I 0.731
runx3 Danio rerio ENSDARG00000052826 I 0.723
runx2b Danio rerio ENSDARG00000059233 I 0.718
CABZ01102124.1 Danio rerio ENSDARG00000103592 I 0.737
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I 0.731
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I 0.723
RUNX3 Dasypus novemcinctus ENSDNOG00000043493 I 0.723
Runx1 Dipodomys ordii ENSDORG00000004347 I 0.738
RUNX1 Equus caballus ENSECAG00000003462 I 0.731
RUNX2 Equus caballus ENSECAG00000020875 I 0.724
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I 0.723
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I 0.738
ENSFALG00000000470 Ficedula albicollis ENSFALG00000000470 I 0.723
RUNX3 Felis catus ENSFCAG00000000680 I 0.723
RUNX2 Felis catus ENSFCAG00000022480 I 0.767
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I 0.769
runx3 Gasterosteus aculeatus ENSGACG00000007301 I 0.723
ENSGACG00000011721 Gasterosteus aculeatus ENSGACG00000011721 I 0.869
runx2b Gasterosteus aculeatus ENSGACG00000012322 I 0.708
RUNX1 Gasterosteus aculeatus ENSGACG00000015276 I 0.700
RUNX1 Gallus gallus ENSGALG00000016022 I 0.738
ENSGALG00000026821 Gallus gallus ENSGALG00000026821 I 0.723
RUNX3 Gorilla gorilla ENSGGOG00000004848 I 0.723
RUNX1 Gorilla gorilla ENSGGOG00000012862 I 0.738
RUNX2 Gorilla gorilla ENSGGOG00000012890 I 0.723
ENSGMOG00000010468 Gadus morhua ENSGMOG00000010468 I 0.715
ENSGMOG00000014088 Gadus morhua ENSGMOG00000014088 I 0.731
ENSGMOG00000019132 Gadus morhua ENSGMOG00000019132 I 0.723
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I 0.723
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.723
RUNX1 Loxodonta africana ENSLAFG00000004290 I 0.738
RUNX2 Loxodonta africana ENSLAFG00000005054 I 0.767
RUNX3 Loxodonta africana ENSLAFG00000008382 I 0.723
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I 0.723
ENSLOCG00000010990 Lepisosteus oculatus ENSLOCG00000010990 I 0.731
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I 0.723
ENSMEUG00000014419 Macropus eugenii ENSMEUG00000014419 I 0.715
ENSMGAG00000002035 Meleagris gallopavo ENSMGAG00000002035 I 0.711
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I 0.769
ENSMGAG00000014534 Meleagris gallopavo ENSMGAG00000014534 I 0.778
RUNX1 Microcebus murinus ENSMICG00000011998 I 0.738
RUNX2 Myotis lucifugus ENSMLUG00000000514 I 0.767
RUNX1 Macaca mulatta ENSMMUG00000001649 I 0.773
RUNX3 Macaca mulatta ENSMMUG00000002420 I 0.715
RUNX2 Macaca mulatta ENSMMUG00000019819 I 0.723
ENSMODG00000013941 Monodelphis domestica ENSMODG00000013941 I 0.723
RUNX2 Monodelphis domestica ENSMODG00000018912 I 0.723
RUNX1 Monodelphis domestica ENSMODG00000021051 I 0.738
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I 0.738
ENSMPUG00000015804 Mustela putorius furo ENSMPUG00000015804 I 0.700
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I 0.738
ENSNLEG00000009021 Nomascus leucogenys ENSNLEG00000009021 I 0.758
RUNX2 Ornithorhynchus anatinus ENSOANG00000008265 I 0.767
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I 0.707
ENSOCUG00000011739 Oryctolagus cuniculus ENSOCUG00000011739 I 0.767
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I 0.738
RUNX3 Oryctolagus cuniculus ENSOCUG00000017751 I 0.723
RUNX2 Otolemur garnettii ENSOGAG00000003900 I 0.723
RUNX3 Otolemur garnettii ENSOGAG00000025633 I 0.723
RUNX1 Otolemur garnettii ENSOGAG00000033362 I 0.738
ENSONIG00000001025 Oreochromis niloticus ENSONIG00000001025 I 0.715
ENSONIG00000001436 Oreochromis niloticus ENSONIG00000001436 I 0.892
ENSONIG00000004914 Oreochromis niloticus ENSONIG00000004914 I 0.708
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I 0.723
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I 0.731
RUNX2 Ochotona princeps ENSOPRG00000002943 I 0.723
RUNX3 Ochotona princeps ENSOPRG00000011273 I 0.723
runx2 Oryzias latipes ENSORLG00000010169 I 0.715
runx3 Oryzias latipes ENSORLG00000017515 I 0.723
ENSORLG00000018584 Oryzias latipes ENSORLG00000018584 I 0.869
RUNX1 Oryzias latipes ENSORLG00000020699 I 0.708
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I 0.723
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I 0.738
ENSPANG00000008140 Papio anubis ENSPANG00000008140 I 0.723
RUNX1 Procavia capensis ENSPCAG00000016747 I 0.746
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I 0.723
ENSPFOG00000013752 Poecilia formosa ENSPFOG00000013752 I 0.969
ENSPFOG00000016115 Poecilia formosa ENSPFOG00000016115 I 0.715
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.731
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I 0.738
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I 0.723
ENSPSIG00000012728 Pelodiscus sinensis ENSPSIG00000012728 I 0.715
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I 0.761
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I 0.738
RUNX3 Pan troglodytes ENSPTRG00000000351 I 0.723
RUNX1 Pan troglodytes ENSPTRG00000013883 I 0.738
RUNX2 Pan troglodytes ENSPTRG00000018228 I 0.723
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I 0.738
RUNX2 Pteropus vampyrus ENSPVAG00000001720 I 0.717
Runx1 Rattus norvegicus ENSRNOG00000001704 I 0.738
Runx2 Rattus norvegicus ENSRNOG00000020193 I 0.723
Runx3 Rattus norvegicus ENSRNOG00000054217 I 0.723
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I 0.723
ENSSHAG00000012559 Sarcophilus harrisii ENSSHAG00000012559 I 0.767
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I 0.738
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I 0.738
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I 0.737
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I 0.723
ENSSTOG00000020082 Ictidomys tridecemlineatus ENSSTOG00000020082 I 0.737
ENSSTOG00000022471 Ictidomys tridecemlineatus ENSSTOG00000022471 I 0.723
RUNX2 Tupaia belangeri ENSTBEG00000000948 I 0.767
RUNX3 Taeniopygia guttata ENSTGUG00000001130 I 0.723
ENSTGUG00000004719 Taeniopygia guttata ENSTGUG00000004719 I 0.703
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I 0.731
runx2b Tetraodon nigroviridis ENSTNIG00000009685 I 0.715
ENSTNIG00000009855 Tetraodon nigroviridis ENSTNIG00000009855 I 0.769
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.723
ENSTNIG00000018690 Tetraodon nigroviridis ENSTNIG00000018690 I 0.708
runx3 Takifugu rubripes ENSTRUG00000001517 I 0.723
runx2 Takifugu rubripes ENSTRUG00000003501 I 0.715
runx1 Takifugu rubripes ENSTRUG00000012611 I 0.715
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I 0.723
RUNX2 Tursiops truncatus ENSTTRG00000006943 I 0.723
RUNX3 Tursiops truncatus ENSTTRG00000009396 I 0.723
RUNX1 Tursiops truncatus ENSTTRG00000014160 I 0.723
ENSXMAG00000003400 Xiphophorus maculatus ENSXMAG00000003400 I 0.715
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I 0.723
Aan_R005895 Calypte anna Aan_R005895 I 0.767
Aan_R007315 Calypte anna Aan_R007315 I 0.789
Afo_R004888 Aptenodytes forsteri Afo_R004888 I 0.789
Afo_R008955 Aptenodytes forsteri Afo_R008955 I 0.750
Alligator_sinensis_CCG001676.1 Alligator sinensis Alligator_sinensis_CCG001676.1 I 0.721
Alligator_sinensis_CCG010991.1 Alligator sinensis Alligator_sinensis_CCG010991.1 I 0.733
Brh_R000794 Buceros rhinoceros Brh_R000794 I 0.769
Brh_R001637 Buceros rhinoceros Brh_R001637 I 0.789
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I 0.731
Cmyd_10020845 Chelonia mydas Cmyd_10020845 I 0.723
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I 0.738
ENSBTAP00000006227-D1 Bos grunniens ENSBTAP00000006227-D1 I 0.767
ENSP00000300305 Macaca fascicularis ENSP00000300305 I 0.738
ENSP00000409227-D1 Bos grunniens ENSP00000409227-D1 I 0.738
Gfo_R000714 Geospiza fortis Gfo_R000714 I 0.703
Gfo_R011596 Geospiza fortis Gfo_R011596 I 0.727
Gfo_R013848 Geospiza fortis Gfo_R013848 I 0.763
Gfo_R015914 Geospiza fortis Gfo_R015914 I 0.713
Myotis_brandtii_RUNX2_10026084 Myotis brandtii Myotis_brandtii_RUNX2_10026084 I 0.723
Ogr17914 Ophisaurus gracilis Ogr17914 I 0.738
Pvit_01165 Pogona vitticeps Pvit_01165 I 0.731
Pvit_04762 Pogona vitticeps Pvit_04762 I 0.738
Pvit_17193 Pogona vitticeps Pvit_17193 I 0.715
Tal_R011874 Tyto alba Tal_R011874 I 0.769
estExt_fgenesh2_kg.C_3770001 Branchiostoma floridae estExt_fgenesh2_kg.C_3770001 I 0.708
estExt_fgenesh2_kg.C_750001 Branchiostoma floridae estExt_fgenesh2_kg.C_750001 I 0.708
runx3 Xenopus tropicalis XB-GENE-487784 I 0.731
runx3.L Xenopus laevis XB-GENE-6487158 I 0.715
runx2.L Xenopus laevis XB-GENE-864817 I 0.715
runx1.L Xenopus laevis XB-GENE-864949 I 0.723
XP_002939386 Xenopus tropicalis XP_002939386 I 0.731
XP_002939387 Xenopus tropicalis XP_002939387 I 0.731
XP_002939388 Xenopus tropicalis XP_002939388 I 0.723
ENSGMOG00000000378 Gadus morhua ENSGMOG00000000378 N 0.808
frrunt Takifugu rubripes ENSTRUG00000006274 N 0.815