LDEC006650 (Leptinotarsa decemlineata)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 LDEC006650 T319696_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.730 0.730
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.730 0.730
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.730 0.730
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.730 0.730
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.730 0.730
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.730 0.730
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.730 0.730
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.730 0.730
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.730 0.730
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.730 0.730
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.730 0.730
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.730 0.730
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.710 0.710
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.710 0.710
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.710 0.710
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.710 0.710
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.710 0.710
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.710 0.710
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.710 0.710
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.710 0.710
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.710 0.710
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.710 0.710
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.710 0.710
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.710 0.710
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.700 0.700
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.700 0.700
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.700 0.700
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.700 0.700
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.700 0.700
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.700 0.700
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.700 0.700
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.700 0.700
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.700 0.700
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.700 0.700
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.700 0.700
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC006650-PA Runt 41 140

Links

Other Runt family TFs
Other Leptinotarsa decemlineata TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Mxi1 Mus musculus ENSMUSG00000025025 D 0.000
MXI1 Homo sapiens ENSG00000119950 D 0.000
ENSTGUG00000015302 Taeniopygia guttata ENSTGUG00000015302 I 0.000
ENSOARG00000009456 Ovis aries ENSOARG00000009456 I 0.000
MXI1 Otolemur garnettii ENSOGAG00000000570 I 0.000
ENSPANG00000020804 Papio anubis ENSPANG00000020804 I 0.000
ENSPSIG00000012742 Pelodiscus sinensis ENSPSIG00000012742 I 0.000
MXI1 Pan troglodytes ENSPTRG00000002936 I 0.000
MXI1 Pteropus vampyrus ENSPVAG00000014983 I 0.000
Mxi1 Rattus norvegicus ENSRNOG00000034078 I 0.000
ENSSTOG00000025776 Ictidomys tridecemlineatus ENSSTOG00000025776 I 0.000
ENSTGUG00000010598 Taeniopygia guttata ENSTGUG00000010598 I 0.000
ENSAMEG00000005262 Ailuropoda melanoleuca ENSAMEG00000005262 I 0.000
MXI1 Tursiops truncatus ENSTTRG00000007895 I 0.000
MXI1 Vicugna pacos ENSVPAG00000003400 I 0.000
Afo_R002778 Aptenodytes forsteri Afo_R002778 I 0.000
Brh_R004607 Buceros rhinoceros Brh_R004607 I 0.000
ENSBTAP00000048182-D1 Bos grunniens ENSBTAP00000048182-D1 I 0.000
ENSP00000331152 Macaca fascicularis ENSP00000331152 I 0.000
Gfo_R002259 Geospiza fortis Gfo_R002259 I 0.000
Myotis_brandtii_Mxi1_10027965 Myotis brandtii Myotis_brandtii_Mxi1_10027965 I 0.000
Ogr11151 Ophisaurus gracilis Ogr11151 I 0.000
Pvit_07222 Pogona vitticeps Pvit_07222 I 0.000
Tal_R006513 Tyto alba Tal_R006513 I 0.000
ENSNLEG00000015457 Nomascus leucogenys ENSNLEG00000015457 I 0.000
MXI1 Anolis carolinensis ENSACAG00000006009 I 0.000
ENSAPLG00000004350 Anas platyrhynchos ENSAPLG00000004350 I 0.000
MXI1 Bos taurus ENSBTAG00000017263 I 0.000
MXI1 Canis familiaris ENSCAFG00000010706 I 0.000
MXI1 Choloepus hoffmanni ENSCHOG00000006556 I 0.000
MXI1 Callithrix jacchus ENSCJAG00000018614 I 0.000
MXI1 Cavia porcellus ENSCPOG00000022901 I 0.000
ENSCSAG00000005171 Chlorocebus sabaeus ENSCSAG00000005171 I 0.000
MXI1 Dasypus novemcinctus ENSDNOG00000002479 I 0.000
Mxi1 Dipodomys ordii ENSDORG00000005656 I 0.000
ENSFALG00000002308 Ficedula albicollis ENSFALG00000002308 I 0.000
MXI1 Felis catus ENSFCAG00000004882 I 0.000
MXI1 Gallus gallus ENSGALG00000008555 I 0.000
MXI1 Gorilla gorilla ENSGGOG00000013614 I 0.000
MXI1 Loxodonta africana ENSLAFG00000014348 I 0.000
MXI1 Meleagris gallopavo ENSMGAG00000010768 I 0.000
ENSMLUG00000016004 Myotis lucifugus ENSMLUG00000016004 I 0.000
MXI1 Macaca mulatta ENSMMUG00000014350 I 0.000
MXI1 Monodelphis domestica ENSMODG00000010546 I 0.000
ENSMPUG00000002095 Mustela putorius furo ENSMPUG00000002095 I 0.000
MXI1 Ornithorhynchus anatinus ENSOANG00000001600 I 0.000
mxd1 Takifugu rubripes ENSTRUG00000014843 N 0.000
MXI1 Sus scrofa ENSSSCG00000022128 N 0.000
ENSSHAG00000015280 Sarcophilus harrisii ENSSHAG00000015280 N 0.000
Cmyd_10011617 Chelonia mydas Cmyd_10011617 N 0.000
Hsal_06326--XP_001122605.1_APIME Harpegnathos saltator Hsal_06326--XP_001122605.1_APIME N 0.000
HHAL004586-PA Halyomorpha halys HHAL004586-PA N 0.000