AFAF000166 (Anopheles farauti)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 AFAF000166 T319744_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.838 0.838
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.708 0.708
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.708 0.708
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.708 0.708
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.708 0.708
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.708 0.708
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.708 0.708
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.708 0.708
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.708 0.708
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.708 0.708
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.708 0.708
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.708 0.708
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.708 0.708
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.708 0.708
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.708 0.708
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.708 0.708
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFAF000166-PA Runt 27 156

Links

Other Runt family TFs
Other Anopheles farauti TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CG7786 Drosophila melanogaster FBgn0034096 D
YQE_01172 Dendroctonus ponderosae YQE_01172 I
LotgiG115895 Lottia gigantea LotgiG115895 I
MESCA008551 Megaselia scalaris MESCA008551 I
NV12599 Nasonia vitripennis NV12599 I
PHUM361070 Pediculus humanus PHUM361070 I
SMAR012395 Strigamia maritima SMAR012395 I
SPU_004842 Strongylocentrotus purpuratus SPU_004842 I
SPU_004843 Strongylocentrotus purpuratus SPU_004843 I
TC004495 Tribolium castaneum TC004495 I
L798_00093 Zootermopsis nevadensis L798_00093 I
YQE_09709 Dendroctonus ponderosae YQE_09709 I
Cflo_03557--XP_001122257.1_APIME Camponotus floridanus Cflo_03557--XP_001122257.1_APIME I
Hsal_03262--XP_001122257.1_APIME Harpegnathos saltator Hsal_03262--XP_001122257.1_APIME I
LCUP016468 Lucilia cuprina LCUP016468 I
MDOA005650 Musca domestica MDOA005650 I
PPAI008653 Phlebotomus papatasi PPAI008653 I
ACEP26731 Atta cephalotes ACEP26731 I
GB46219 Apis mellifera GB46219 I
GE14085 Drosophila yakuba FBgn0231711 I
GK20980 Drosophila willistoni FBgn0222972 I
GJ21676 Drosophila virilis FBgn0208795 I
GD15226 Drosophila simulans FBgn0186896 I
GM20077 Drosophila sechellia FBgn0174960 I
GL11555 Drosophila persimilis FBgn0149164 I
GI18660 Drosophila mojavensis FBgn0141399 I
GH21058 Drosophila grimshawi FBgn0128520 I
GG22289 Drosophila erecta FBgn0114461 I
GF12658 Drosophila ananassae FBgn0089694 I
GA20586 Drosophila pseudoobscura FBgn0080580 I
CGI_10005528 Crassostrea gigas CGI_10005528 I
DAPPUDRAFT_321111 Daphnia pulex DAPPUDRAFT_321111 N