CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AQUA008686
(
Anopheles quadriannulatus
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
AQUA008686
T319763_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.768
0.768
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN
NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.768
0.768
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.768
0.768
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH
DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.768
0.768
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM
KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.768
0.768
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.768
0.768
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN
NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.768
0.768
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN
NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.768
0.768
RUNX3
M11252_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.768
0.768
RUNX3
M11253_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.768
0.768
RUNX3
M11254_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.768
0.768
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.768
0.768
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN
NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.758
0.758
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV
BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.758
0.758
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV
BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.758
0.758
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV
BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.758
0.758
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.758
0.758
Runx1
M09633_2.00
Mus musculus
NWAACCACAR
YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.758
0.758
RUNX1
M11258_2.00
Homo sapiens
ACCRCA
TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.758
0.758
RUNX1
M11259_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.758
0.758
RUNX1
M11260_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.758
0.758
RUNX1
M11261_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.758
0.758
RUNX1
M11262_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.758
0.758
RUNX1
M11263_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.758
0.758
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN
NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.737
0.737
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.737
0.737
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.737
0.737
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR
YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.737
0.737
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.737
0.737
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.737
0.737
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV
BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.737
0.737
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.737
0.737
RUNX2
M11255_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.737
0.737
RUNX2
M11256_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.737
0.737
RUNX2
M11257_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.737
0.737
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.737
0.737
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.726
0.726
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.726
0.726
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.726
0.726
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.726
0.726
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AQUA008686-PA
Runt
139
233
LGDFLSEHPGELIRTGSPLFVCTVLPPHWRSNKTLPVAFKVVALGDVGDGTMVTVRAGNDENYCAELRNCTAVMKNQVAKFNDLRFVGRSGRAKI
Links
Other
Runt
family TFs
Other
Anopheles quadriannulatus
TFs
222 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_06292
Capronia epimyces
A1O3_06292
I
fgenesh1_pm.00153_#_158
Aspergillus carbonarius
fgenesh1_pm.00153_#_158
I
PDE_09868
Penicillium oxalicum
PDE_09868
I
THITE_2132051
Thielavia terrestris
THITE_2132051
I
TRIREDRAFT_60665
Trichoderma reesei
TRIREDRAFT_60665
N
S40288_09286
Stachybotrys chartarum
S40288_09286
N
SBOR_5571
Sclerotinia borealis
SBOR_5571
N
SMAC_07677
Sordaria macrospora
SMAC_07677
N
SS1G_13001
Sclerotinia sclerotiorum
SS1G_13001
N
TRIATDRAFT_222577
Trichoderma atroviride
TRIATDRAFT_222577
N
PMAA_073800
Talaromyces marneffei
PMAA_073800
N
TSTA_009670
Talaromyces stipitatus
TSTA_009670
N
U727_00430311331
Penicillium solitum
U727_00430311331
N
VHEMI03668
Torrubiella hemipterigena
VHEMI03668
N
fgenesh1_pm.00866_#_602
Aspergillus carbonarius
fgenesh1_pm.00866_#_602
N
Pc13g06530
Penicillium chrysogenum
Pc13g06530
N
Pc21g18560
Penicillium chrysogenum
Pc21g18560
N
PMAA_073800
Penicillium marneffei
PMAA_073800
N
PV05_03926
Exophiala xenobiotica
PV05_03926
N
PITC_065540
Penicillium italicum
PITC_065540
N
PEX1_099950
Penicillium expansum
PEX1_099950
N
PEX1_080650
Penicillium expansum
PEX1_080650
N
PCH_Pc21g18560
Penicillium rubens
PCH_Pc21g18560
N
PCH_Pc13g06530
Penicillium rubens
PCH_Pc13g06530
N
HCBG_05889
Histoplasma capsulatum
HCBG_05889
N
EURHEDRAFT_448370
Aspergillus ruber
EURHEDRAFT_448370
N
Cob_07663
Colletotrichum orbiculare
Cob_07663
N
ATEG_09249
Aspergillus terreus
CADATEAG00003546
N
CADAORAG00009780
Aspergillus oryzae
CADAORAG00009780
N
CADANGAG00002494
Aspergillus niger
CADANGAG00002494
N
CADAFLAG00010617
Aspergillus flavus
CADAFLAG00010617
N
BDDG_09520
Blastomyces dermatitidis
BDDG_09520
N
Bcin01g00970
Botrytis cinerea
Bcin01g00970
N
BAUCODRAFT_136463
Baudoinia compniacensis
BAUCODRAFT_136463
N