TRE_0000705801 (Trichobilharzia regenti)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 TRE_0000705801 T319860_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smp_174320
M02457_2.00 		Schistosoma mansoni
NNAACCGCARN
NYTGCGGTTNN		 PBM
Weirauch et al.(2014)
pTH8368 		0.979 0.979
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0000705801-mRNA-1 Runt 11 105

Links

Other Runt family TFs
Other Trichobilharzia regenti TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_10773 Exophiala aquamarina A1O9_10773 I
UCRNP2_6160 Neofusicoccum parvum UCRNP2_6160 I
SNOG_15057 Phaeosphaeria nodorum SNOG_15057 I
PV06_10058 Exophiala oligosperma PV06_10058 I
MPH_03547 Macrophomina phaseolina MPH_03547 I
MGG_05709 Magnaporthe oryzae MGG_05709 I
LEMA_P050050.1 Leptosphaeria maculans LEMA_P050050.1 I
SNOG_15057 Stagonospora nodorum SNOG_15057 I
M437DRAFT_84437 Aureobasidium melanogenum M437DRAFT_84437 N
VDBG_05122 Verticillium alfalfae VDBG_05122 N
VDAG_08823 Verticillium dahliae VDAG_08823 N
PFICI_01954 Pestalotiopsis fici PFICI_01954 N
MAPG_06566 Magnaporthe poae MAPG_06566 N
M438DRAFT_372080 Aureobasidium pullulans M438DRAFT_372080 N
GLRG_03872 Colletotrichum graminicola GLRG_03872 N
GGTG_01326 Gaeumannomyces graminis GGTG_01326 N
CSUB01_10562 Colletotrichum sublineola CSUB01_10562 N
Cob_01730 Colletotrichum orbiculare Cob_01730 N
CFIO01_07294 Colletotrichum fioriniae CFIO01_07294 N
BAUCODRAFT_189575 Baudoinia compniacensis BAUCODRAFT_189575 N
AUEXF2481DRAFT_24869 Aureobasidium subglaciale AUEXF2481DRAFT_24869 N
VDBG_05122 Verticillium albo atrum VDBG_05122 N