Bra011600 (Brassica rapa)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Bra011600 T319952_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.918 0.918
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra011600.1-P RWP-RK 641 689

Links

Other RWP-RK family TFs
Other Brassica rapa TFs

414 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV05_04333 Exophiala xenobiotica PV05_04333 N 0.000
fgenesh1_pg.00868_#_68 Aspergillus carbonarius fgenesh1_pg.00868_#_68 N 0.000
estExt_fgenesh1_pg.C_sca_17_chr8_1_00069 Nectria haematococca estExt_fgenesh1_pg.C_sca_17_chr8_1_00069 N 0.000
Z519_01024 Cladophialophora bantiana Z519_01024 N 0.000
Z518_06537 Rhinocladiella mackenziei Z518_06537 N 0.000
W97_09274 Coniosporium apollinis W97_09274 N 0.000
PV10_00794 Exophiala mesophila PV10_00794 N 0.000
PV07_11558 Cladophialophora immunda PV07_11558 N 0.000
PV06_01296 Exophiala oligosperma PV06_01296 N 0.000
PV05_08746 Exophiala xenobiotica PV05_08746 N 0.000
A1O3_06840 Capronia epimyces A1O3_06840 N 0.000
NechaG101164 Fusarium solani NechaG101164 N 0.000
HMPREF1541_00390 Cyphellophora europaea HMPREF1541_00390 N 0.000
HMPREF1120_09145 Exophiala dermatitidis HMPREF1120_09145 N 0.000
G647_02803 Cladophialophora carrionii G647_02803 N 0.000
CADANGAG00009534 Aspergillus niger CADANGAG00009534 N 0.000
ACLA_065740 Aspergillus clavatus CADACLAG00006139 N 0.000
A1O7_07289 Cladophialophora yegresii A1O7_07289 N 0.000
A1O5_09572 Cladophialophora psammophila A1O5_09572 N 0.000