fgenesh1_pg.C_scaffold_8002648 (Arabidopsis lyrata)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 fgenesh1_pg.C_scaffold_8002648 T320037_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.714 0.714
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_8002648 RWP-RK 154 202

Links

Other RWP-RK family TFs
Other Arabidopsis lyrata TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGAP028230 Anopheles gambiae AGAP028230 N 0.000
AATE005226 Anopheles atroparvus AATE005226 N 0.000
ACHR000053 Anopheles christyi ACHR000053 N 0.000
ACOM029903 Anopheles coluzzii ACOM029903 N 0.000
ACUA009110 Anopheles culicifacies ACUA009110 N 0.000
ADIR011460 Anopheles dirus ADIR011460 N 0.000
AEPI001398 Anopheles epiroticus AEPI001398 N 0.000
AFAF017433 Anopheles farauti AFAF017433 N 0.000
AFUN008889 Anopheles funestus AFUN008889 N 0.000
AMEC012061 Anopheles melas AMEC012061 N 0.000
AMEM004143 Anopheles merus AMEM004143 N 0.000
AMIN014756 Anopheles minimus AMIN014756 N 0.000
AQUA003528 Anopheles quadriannulatus AQUA003528 N 0.000
ASTEI03736 Anopheles stephensi ASTEI03736 N 0.000