CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GLYMA06G20881
(
Glycine max
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
GLYMA06G20881
T320083_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.776
0.776
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.776
0.776
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA06G20881.1
RWP-RK
136
184
MLSRTTVSQYFYMPISKAARELNVGLTHLKKRCRELGIQRWPHRKLMSL
Links
Other
RWP-RK
family TFs
Other
Glycine max
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMEUG00000013090
Macropus eugenii
ENSMEUG00000013090
I
0.000
ZNF692
Monodelphis domestica
ENSMODG00000009168
I
0.000
ZNF692
Ochotona princeps
ENSOPRG00000011333
I
0.000
ENSSHAG00000005493
Sarcophilus harrisii
ENSSHAG00000005493
I
0.000
ZNF692
Anolis carolinensis
ENSACAG00000011640
N
0.000
ENSAPLG00000015747
Anas platyrhynchos
ENSAPLG00000015747
N
0.000
znf692
Danio rerio
ENSDARG00000078434
N
0.000
ENSFALG00000008357
Ficedula albicollis
ENSFALG00000008357
N
0.000
ENSGALG00000019836
Gallus gallus
ENSGALG00000019836
N
0.000
ENSLACG00000004152
Latimeria chalumnae
ENSLACG00000004152
N
0.000
ENSLOCG00000010151
Lepisosteus oculatus
ENSLOCG00000010151
N
0.000
ZNF692
Meleagris gallopavo
ENSMGAG00000000638
N
0.000
Afo_R010193
Aptenodytes forsteri
Afo_R010193
N
0.000
Gfo_R002611
Geospiza fortis
Gfo_R002611
N
0.000
Ogr15087
Ophisaurus gracilis
Ogr15087
N
0.000