CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OPUNC02G29870
(
Oryza punctata
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
OPUNC02G29870
T320624_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.714
0.714
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.714
0.714
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC02G29870.1
RWP-RK
83
131
PLTFKLVSQYFCMPIKQAAQELNVGLTLLKRRCRVLGIPRWPHRKVKSL
Links
Other
RWP-RK
family TFs
Other
Oryza punctata
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FEZF2
Gorilla gorilla
ENSGGOG00000026200
I
0.000
FEZF1
Tupaia belangeri
ENSTBEG00000005307
N
0.000
HDID_0001087701
Hymenolepis diminuta
HDID_0001087701
N
0.000
Ogr03134
Ophisaurus gracilis
Ogr03134
N
0.000
Myotis_brandtii_AASS_10009316
Myotis brandtii
Myotis_brandtii_AASS_10009316
N
0.000
Cmyd_10003456
Chelonia mydas
Cmyd_10003456
N
0.000
Alligator_sinensis_CCG021039.1
Alligator sinensis
Alligator_sinensis_CCG021039.1
N
0.000
NEMVEDRAFT_v1g230810
Nematostella vectensis
NEMVEDRAFT_v1g230810
N
0.000
KGM_06814
Danaus plexippus
KGM_06814
N
0.000
FEZF1
Vicugna pacos
ENSVPAG00000002991
N
0.000
ENSTTRG00000013155
Tursiops truncatus
ENSTTRG00000013155
N
0.000
Fezf2
Dipodomys ordii
ENSDORG00000000030
N
0.000
FEZF1
Pan troglodytes
ENSPTRG00000019631
N
0.000
ENSPPYG00000017951
Pongo abelii
ENSPPYG00000017951
N
0.000
FEZF1
Procavia capensis
ENSPCAG00000011405
N
0.000
FEZF1
Ochotona princeps
ENSOPRG00000015502
N
0.000
FEZF1
Echinops telfairi
ENSETEG00000020278
N
0.000
FEZF1
Erinaceus europaeus
ENSEEUG00000002685
N
0.000
ENSDORG00000002484
Dipodomys ordii
ENSDORG00000002484
N
0.000