CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC09G17100
(
Oryza punctata
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
OPUNC09G17100
T320630_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.878
0.878
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.878
0.878
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC09G17100.1
RWP-RK
529
577
TVSLQVLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGINRWPSRKIKKV
OPUNC09G17100.2
RWP-RK
529
577
TVSLQVLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGINRWPSRKIKKV
Links
Other
RWP-RK
family TFs
Other
Oryza punctata
TFs
416 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGGC5_6429
Colletotrichum gloeosporioides
CGGC5_6429
N
CH063_12828
Colletotrichum higginsianum
CH063_12828
N
EV44_g1725
Erysiphe necator
EV44_g1725
N
GLRG_04435
Colletotrichum graminicola
GLRG_04435
N
GSTUM_00004693001
Tuber melanosporum
GSTUM_00004693001
N
HMPREF1120_05468
Exophiala dermatitidis
HMPREF1120_05468
N
HMPREF1624_06130
Sporothrix schenckii
HMPREF1624_06130
N
MPH_04816
Macrophomina phaseolina
MPH_04816
N
PV06_00042
Exophiala oligosperma
PV06_00042
N
PV08_04487
Exophiala spinifera
PV08_04487
N
VDAG_08764
Verticillium dahliae
VDAG_08764
N