PGSC0003DMG401005796 (Solanum tuberosum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 PGSC0003DMG401005796 T320685_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.939 0.939
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400014836 RWP-RK 294 342
PGSC0003DMT400014837 RWP-RK 611 659
PGSC0003DMT400014838 RWP-RK 544 592
PGSC0003DMT400014839 RWP-RK 1 21

Links

Other RWP-RK family TFs
Other Solanum tuberosum TFs

425 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EFV53100 Trichinella spiralis EFV53100 I 0.000
SMAR003779 Strigamia maritima SMAR003779 I 0.000
D917_06384 Trichinella nativa D917_06384 I 0.000
BGIBMGA004491 Bombyx mori BGIBMGA004491 N 0.000
TTRE_0000281101 Trichuris trichiura TTRE_0000281101 N 0.000