TCM_019949 (Theobroma cacao)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 TCM_019949 T320850_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY04774 RWP-RK 602 650
EOY04775 RWP-RK 528 576
EOY04776 RWP-RK 492 540
EOY04777 RWP-RK 556 604

Links

Other RWP-RK family TFs
Other Theobroma cacao TFs

422 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TP63 Homo sapiens ENSG00000073282 D 0.000
Trp63 Mus musculus ENSMUSG00000022510 D 0.000
ENSPSIG00000016009 Pelodiscus sinensis ENSPSIG00000016009 I 0.000
ENSSTOG00000013771 Ictidomys tridecemlineatus ENSSTOG00000013771 I 0.000
TP63 Sus scrofa ENSSSCG00000025592 I 0.000
ENSSHAG00000007507 Sarcophilus harrisii ENSSHAG00000007507 I 0.000
TP63 Sorex araneus ENSSARG00000012752 I 0.000
Tp63 Rattus norvegicus ENSRNOG00000001924 I 0.000
TP63 Pteropus vampyrus ENSPVAG00000009056 I 0.000
TP63 Pan troglodytes ENSPTRG00000015733 I 0.000
TP63 Taeniopygia guttata ENSTGUG00000009377 I 0.000
ENSPPYG00000014401 Pongo abelii ENSPPYG00000014401 I 0.000
ENSPFOG00000000910 Poecilia formosa ENSPFOG00000000910 I 0.000
TP63 Procavia capensis ENSPCAG00000005011 I 0.000
ENSPANG00000006656 Papio anubis ENSPANG00000006656 I 0.000
tp63 Oryzias latipes ENSORLG00000015665 I 0.000
ENSONIG00000019325 Oreochromis niloticus ENSONIG00000019325 I 0.000
TP63 Otolemur garnettii ENSOGAG00000003838 I 0.000
ENSOARG00000020478 Ovis aries ENSOARG00000020478 I 0.000
tp63 Tetraodon nigroviridis ENSTNIG00000013774 I 0.000
tp63 Takifugu rubripes ENSTRUG00000003420 I 0.000
ENSTSYG00000003709 Tarsius syrichta ENSTSYG00000003709 I 0.000
TP63 Tursiops truncatus ENSTTRG00000011638 I 0.000
TP63 Vicugna pacos ENSVPAG00000012350 I 0.000
ENSXMAG00000016425 Xiphophorus maculatus ENSXMAG00000016425 I 0.000
Aan_R013385 Calypte anna Aan_R013385 I 0.000
Afo_R010233 Aptenodytes forsteri Afo_R010233 I 0.000
ENSP00000264731-D1 Bos grunniens ENSP00000264731-D1 I 0.000
ENSP00000264731 Macaca fascicularis ENSP00000264731 I 0.000
Gfo_R004420 Geospiza fortis Gfo_R004420 I 0.000
Myotis_brandtii_Tp63_10011644 Myotis brandtii Myotis_brandtii_Tp63_10011644 I 0.000
Pvit_07832 Pogona vitticeps Pvit_07832 I 0.000
tp63 Xenopus tropicalis XB-GENE-479868 I 0.000
tp63.L Xenopus laevis XB-GENE-865317 I 0.000
TP63 Gorilla gorilla ENSGGOG00000005113 I 0.000
ENSAMXG00000004843 Astyanax mexicanus ENSAMXG00000004843 I 0.000
ENSAPLG00000012917 Anas platyrhynchos ENSAPLG00000012917 I 0.000
TP63 Bos taurus ENSBTAG00000015460 I 0.000
TP63 Canis familiaris ENSCAFG00000013961 I 0.000
TP63 Choloepus hoffmanni ENSCHOG00000010497 I 0.000
TP63 Callithrix jacchus ENSCJAG00000014256 I 0.000
TP63 Cavia porcellus ENSCPOG00000014770 I 0.000
tp63 Danio rerio ENSDARG00000044356 I 0.000
TP63 Dasypus novemcinctus ENSDNOG00000016582 I 0.000
Trp63 Dipodomys ordii ENSDORG00000002061 I 0.000
TP63 Equus caballus ENSECAG00000018546 I 0.000
ENSFALG00000007393 Ficedula albicollis ENSFALG00000007393 I 0.000
TP63 Felis catus ENSFCAG00000000790 I 0.000
ENSGACG00000013629 Gasterosteus aculeatus ENSGACG00000013629 I 0.000
TP63 Gallus gallus ENSGALG00000007324 I 0.000
TP63 Oryctolagus cuniculus ENSOCUG00000016465 I 0.000
ENSGMOG00000000413 Gadus morhua ENSGMOG00000000413 I 0.000
ENSLACG00000014214 Latimeria chalumnae ENSLACG00000014214 I 0.000
TP63 Loxodonta africana ENSLAFG00000031461 I 0.000
ENSLOCG00000005148 Lepisosteus oculatus ENSLOCG00000005148 I 0.000
ENSMEUG00000000762 Macropus eugenii ENSMEUG00000000762 I 0.000
TP63 Meleagris gallopavo ENSMGAG00000007535 I 0.000
TP63 Microcebus murinus ENSMICG00000005240 I 0.000
TP63 Myotis lucifugus ENSMLUG00000015597 I 0.000
TP63 Macaca mulatta ENSMMUG00000016466 I 0.000
TP63 Monodelphis domestica ENSMODG00000015060 I 0.000
ENSMPUG00000003438 Mustela putorius furo ENSMPUG00000003438 I 0.000
ENSNLEG00000006723 Nomascus leucogenys ENSNLEG00000006723 I 0.000
TP63 Ornithorhynchus anatinus ENSOANG00000013795 I 0.000
ENSAMEG00000000763 Ailuropoda melanoleuca ENSAMEG00000000763 I 0.000