CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_4DL_E6F4A32C9
(
Triticum aestivum
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
Traes_4DL_E6F4A32C9
T320870_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.796
0.796
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.755
0.755
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_4DL_E6F4A32C9.1
RWP-RK
376
424
TVSLQELRKHFAGSLKEAAKNLGVCPTTLKRICRHHGIDRWPSRKIKKV
Links
Other
RWP-RK
family TFs
Other
Triticum aestivum
TFs
398 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SSLN_0000148201
Schistocephalus solidus
SSLN_0000148201
N
0.000