Pm022964 (Prunus mume)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Pm022964 T320926_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.837 0.837
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm022964 RWP-RK 595 643

Links

Other RWP-RK family TFs
Other Prunus mume TFs

410 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYCFIDRAFT_34745 Pseudocercospora fijiensis MYCFIDRAFT_34745 I 0.000
e_gw1.7.93.1 Mycosphaerella fijiensis e_gw1.7.93.1 I 0.000
UCRNP2_10087 Neofusicoccum parvum UCRNP2_10087 I 0.000
TRIVIDRAFT_221632 Trichoderma virens TRIVIDRAFT_221632 I 0.000
PFICI_04665 Pestalotiopsis fici PFICI_04665 I 0.000
MYCTH_2298970 Myceliophthora thermophila MYCTH_2298970 I 0.000
CFIO01_12540 Colletotrichum fioriniae CFIO01_12540 I 0.000
MPH_12582 Macrophomina phaseolina MPH_12582 I 0.000
MGG_12339 Magnaporthe oryzae MGG_12339 I 0.000
GLRG_02919 Colletotrichum graminicola GLRG_02919 I 0.000
DOTSEDRAFT_161080 Dothistroma septosporum DOTSEDRAFT_161080 I 0.000
CHGG_04697 Chaetomium globosum CHGG_04697 I 0.000
CH063_02263 Colletotrichum higginsianum CH063_02263 I 0.000
CSUB01_03432 Colletotrichum sublineola CSUB01_03432 N 0.000
PTRG_03090 Pyrenophora triticirepentis PTRG_03090 N 0.000
PTT_04142 Pyrenophora teres PTT_04142 N 0.000
S40285_01002 Stachybotrys chlorohalonata S40285_01002 N 0.000
S40288_05338 Stachybotrys chartarum S40288_05338 N 0.000
CGGC5_3069 Colletotrichum gloeosporioides CGGC5_3069 N 0.000