CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.272130
(
Cucumis sativus
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02042 (RWP-RK)
IPR003035
Cucsa.272130
T320958_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.939
0.939
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.857
0.857
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.272130.1
RWP-RK
624
672
TITLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV
Cucsa.272130.2
RWP-RK
624
672
TITLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV
Links
Other
RWP-RK
family TFs
Other
Cucumis sativus
TFs
413 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_10378
Aspergillus nidulans
CADANIAG00009880
D
0.000
NCU06399
Neurospora crassa
NCU06399
D
0.000
CIMG_08892
Coccidioides immitis
CIMG_08892
I
0.000
MCYG_02695
Microsporum canis
MCYG_02695
I
0.000
SNOG_08036
Stagonospora nodorum
SNOG_08036
I
0.000
A1O1_02576
Capronia coronata
A1O1_02576
I
0.000
A1O3_05449
Capronia epimyces
A1O3_05449
I
0.000
A1O5_01242
Cladophialophora psammophila
A1O5_01242
I
0.000
A1O7_08736
Cladophialophora yegresii
A1O7_08736
I
0.000
A1O9_12266
Exophiala aquamarina
A1O9_12266
I
0.000
ACRE_013080
Acremonium chrysogenum
ACRE_013080
I
0.000
ARB_05956
Arthroderma benhamiae
ARB_05956
I
0.000
AUEXF2481DRAFT_4094
Aureobasidium subglaciale
AUEXF2481DRAFT_4094
I
0.000
BAUCODRAFT_269899
Baudoinia compniacensis
BAUCODRAFT_269899
I
0.000
BBA_00488
Beauveria bassiana
BBA_00488
I
0.000
BDDG_07691
Blastomyces dermatitidis
BDDG_07691
I
0.000
BGHDH14_bgh03757
Blumeria graminis
BGHDH14_bgh03757
I
0.000
ACLA_055970
Aspergillus clavatus
CADACLAG00005179
I
0.000
CADAFLAG00008024
Aspergillus flavus
CADAFLAG00008024
I
0.000
AFUA_4G02940
Aspergillus fumigatus
CADAFUAG00001401
I
0.000
CADANGAG00011236
Aspergillus niger
CADANGAG00011236
I
0.000
CADAORAG00000177
Aspergillus oryzae
CADAORAG00000177
I
0.000
ATEG_07901
Aspergillus terreus
CADATEAG00000497
I
0.000
NFIA_030610
Neosartorya fischeri
CADNFIAG00002762
I
0.000
CCM_04263
Cordyceps militaris
CCM_04263
I
0.000
CFIO01_07847
Colletotrichum fioriniae
CFIO01_07847
I
0.000
CGGC5_1206
Colletotrichum gloeosporioides
CGGC5_1206
I
0.000
CH063_13592
Colletotrichum higginsianum
CH063_13592
I
0.000
CMQ_2549
Grosmannia clavigera
CMQ_2549
I
0.000
Cob_10575
Colletotrichum orbiculare
Cob_10575
I
0.000
COCC4DRAFT_40407
Bipolaris maydis
COCC4DRAFT_40407
I
0.000
COCCADRAFT_6984
Bipolaris zeicola
COCCADRAFT_6984
I
0.000
COCMIDRAFT_33369
Bipolaris oryzae
COCMIDRAFT_33369
I
0.000
COCSADRAFT_97657
Bipolaris sorokiniana
COCSADRAFT_97657
I
0.000
COCVIDRAFT_17332
Bipolaris victoriae
COCVIDRAFT_17332
I
0.000
CPC735_064040
Coccidioides posadasii
CPC735_064040
I
0.000
CPUR_06057
Claviceps purpurea
CPUR_06057
I
0.000
CSUB01_02829
Colletotrichum sublineola
CSUB01_02829
I
0.000
CTHT_0032650
Chaetomium thermophilum
CTHT_0032650
I
0.000
DOTSEDRAFT_73911
Dothistroma septosporum
DOTSEDRAFT_73911
I
0.000
DRE_06529
Drechslerella stenobrocha
DRE_06529
I
0.000
EPUS_01825
Endocarpon pusillum
EPUS_01825
I
0.000
EURHEDRAFT_411156
Aspergillus ruber
EURHEDRAFT_411156
I
0.000
EV44_g4901
Erysiphe necator
EV44_g4901
I
0.000
F503_08759
Ophiostoma piceae uamh
F503_08759
I
0.000
FFUJ_04663
Fusarium fujikuroi
FFUJ_04663
I
0.000
FGRRES_09832
Fusarium graminearum
FGRRES_09832
I
0.000
FOXG_08221
Fusarium oxysporum
FOXG_08221
I
0.000
FPSE_10348
Fusarium pseudograminearum
FPSE_10348
I
0.000
FVEG_06450
Fusarium verticillioides
FVEG_06450
I
0.000
G647_07711
Cladophialophora carrionii
G647_07711
I
0.000
GGTG_08387
Gaeumannomyces graminis
GGTG_08387
I
0.000
GLRG_02817
Colletotrichum graminicola
GLRG_02817
I
0.000
GSTUM_00012070001
Tuber melanosporum
GSTUM_00012070001
I
0.000
H072_3248
Dactylellina haptotyla
H072_3248
I
0.000
H102_02845
Trichophyton rubrum
H102_02845
I
0.000
H105_02864
Trichophyton soudanense
H105_02864
I
0.000
HCBG_08448
Histoplasma capsulatum
HCBG_08448
I
0.000
HMPREF1120_07358
Exophiala dermatitidis
HMPREF1120_07358
I
0.000
HMPREF1541_04204
Cyphellophora europaea
HMPREF1541_04204
I
0.000
HMPREF1624_06072
Sporothrix schenckii
HMPREF1624_06072
I
0.000
LEMA_P075830.1
Leptosphaeria maculans
LEMA_P075830.1
I
0.000
M437DRAFT_18084
Aureobasidium melanogenum
M437DRAFT_18084
I
0.000
M7I_6846
Glarea lozoyensis
M7I_6846
I
0.000
MAC_06402
Metarhizium acridum
MAC_06402
I
0.000
MAJ_07228
Metarhizium majus
MAJ_07228
I
0.000
MAM_03966
Metarhizium album
MAM_03966
I
0.000
MANI_020708
Metarhizium anisopliae
MANI_020708
I
0.000
MBM_06253
Marssonina brunnea
MBM_06253
I
0.000
MBR_00309
Metarhizium brunneum
MBR_00309
I
0.000
MCYG_02695
Arthroderma otae
MCYG_02695
I
0.000
MGG_06131
Magnaporthe oryzae
MGG_06131
I
0.000
MGU_01258
Metarhizium guizhouense
MGU_01258
I
0.000
MGYG_08430
Microsporum gypseum
MGYG_08430
I
0.000
MPH_02812
Macrophomina phaseolina
MPH_02812
I
0.000
MYCTH_2299061
Myceliophthora thermophila
MYCTH_2299061
I
0.000
NechaG76538
Fusarium solani
NechaG76538
I
0.000
NEUTE1DRAFT_121024
Neurospora tetrasperma
NEUTE1DRAFT_121024
I
0.000
OCS_02153
Ophiocordyceps sinensis
OCS_02153
I
0.000
PAAG_01597
Paracoccidioides sp lutzii
PAAG_01597
I
0.000
PCH_Pc12g13890
Penicillium rubens
PCH_Pc12g13890
I
0.000
PDE_01297
Penicillium oxalicum
PDE_01297
I
0.000
PDIP_77620
Penicillium digitatum
PDIP_77620
I
0.000
PEX1_065040
Penicillium expansum
PEX1_065040
I
0.000
PFICI_05721
Pestalotiopsis fici
PFICI_05721
I
0.000
PITC_048290
Penicillium italicum
PITC_048290
I
0.000
PMAA_006130
Talaromyces marneffei
PMAA_006130
I
0.000
PODANS_3_4790
Podospora anserina
PODANS_3_4790
I
0.000
PTRG_08316
Pyrenophora triticirepentis
PTRG_08316
I
0.000
PTT_12277
Pyrenophora teres
PTT_12277
I
0.000
PV04_09319
Capronia semiimmersa
PV04_09319
I
0.000
PV05_00805
Exophiala xenobiotica
PV05_00805
I
0.000
PV06_05138
Exophiala oligosperma
PV06_05138
I
0.000
PV07_00488
Cladophialophora immunda
PV07_00488
I
0.000
PV08_09059
Exophiala spinifera
PV08_09059
I
0.000
PV09_01316
Verruconis gallopava
PV09_01316
I
0.000
PV10_04959
Exophiala mesophila
PV10_04959
I
0.000
PV11_02396
Exophiala sideris
PV11_02396
I
0.000
S40285_06955
Stachybotrys chlorohalonata
S40285_06955
I
0.000
S40288_05306
Stachybotrys chartarum
S40288_05306
I
0.000
SEPMUDRAFT_150066
Sphaerulina musiva
SEPMUDRAFT_150066
I
0.000
SETTUDRAFT_96438
Setosphaeria turcica
SETTUDRAFT_96438
I
0.000
SNOG_08036
Phaeosphaeria nodorum
SNOG_08036
I
0.000
SPBR_00166
Sporothrix brasiliensis
SPBR_00166
I
0.000
SS1G_13065
Sclerotinia sclerotiorum
SS1G_13065
I
0.000
THITE_2115495
Thielavia terrestris
THITE_2115495
I
0.000
TRIATDRAFT_168746
Trichoderma atroviride
TRIATDRAFT_168746
I
0.000
TRIREDRAFT_41573
Trichoderma reesei
TRIREDRAFT_41573
I
0.000
TRIVIDRAFT_192202
Trichoderma virens
TRIVIDRAFT_192202
I
0.000
TRV_07458
Trichophyton verrucosum
TRV_07458
I
0.000
TSTA_104870
Talaromyces stipitatus
TSTA_104870
I
0.000
U727_0043258041
Penicillium solitum
U727_0043258041
I
0.000
UCRNP2_2391
Neofusicoccum parvum
UCRNP2_2391
I
0.000
UREG_02800
Uncinocarpus reesii
UREG_02800
I
0.000
UV8b_314
Ustilaginoidea virens
UV8b_314
I
0.000
VDAG_08933
Verticillium dahliae
VDAG_08933
I
0.000
VHEMI03455
Torrubiella hemipterigena
VHEMI03455
I
0.000
W97_04573
Coniosporium apollinis
W97_04573
I
0.000
X797_002671
Metarhizium robertsii
X797_002671
I
0.000
Z517_01506
Fonsecaea pedrosoi
Z517_01506
I
0.000
Z518_05180
Rhinocladiella mackenziei
Z518_05180
I
0.000
fgenesh1_kg.C_scaffold_5000057
Cochliobolus heterostrophus C5
fgenesh1_kg.C_scaffold_5000057
I
0.000
fgenesh1_pg.sca_18_chr2_1_0000729
Nectria haematococca
fgenesh1_pg.sca_18_chr2_1_0000729
I
0.000
scaffold_3-snap.528.1
Neurospora discreta
scaffold_3-snap.528.1
I
0.000
e_gw1.00710.230.1
Aspergillus carbonarius
e_gw1.00710.230.1
I
0.000
estExt_fgenesh1_pm.C_30735
Cryphonectria parasitica
estExt_fgenesh1_pm.C_30735
I
0.000
Pc12g13890
Penicillium chrysogenum
Pc12g13890
I
0.000
PMAA_006130
Penicillium marneffei
PMAA_006130
I
0.000
MYCFIDRAFT_89211
Pseudocercospora fijiensis
MYCFIDRAFT_89211
N
0.000
estExt_fgenesh1_pg.C_400021
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_400021
N
0.000