Eucgr.A00040 (Eucalyptus grandis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Eucgr.A00040 T321113_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A00040.1 RWP-RK 602 650

Links

Other RWP-RK family TFs
Other Eucalyptus grandis TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCC4DRAFT_142823 Bipolaris maydis COCC4DRAFT_142823 N 0.000
COCCADRAFT_103469 Bipolaris zeicola COCCADRAFT_103469 N 0.000
COCMIDRAFT_27947 Bipolaris oryzae COCMIDRAFT_27947 N 0.000
COCSADRAFT_26159 Bipolaris sorokiniana COCSADRAFT_26159 N 0.000
COCVIDRAFT_38114 Bipolaris victoriae COCVIDRAFT_38114 N 0.000
HCBG_05581 Histoplasma capsulatum HCBG_05581 N 0.000
TRIATDRAFT_132529 Trichoderma atroviride TRIATDRAFT_132529 N 0.000
TRIREDRAFT_122293 Trichoderma reesei TRIREDRAFT_122293 N 0.000
estExt_Genewise1Plus.C_180458 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_180458 N 0.000
fgenesh1_pg.sca_8_chr1_1_0000361 Nectria haematococca fgenesh1_pg.sca_8_chr1_1_0000361 N 0.000