Pavir.J04809 (Panicum virgatum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Pavir.J04809 T321228_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J04809.1.p RWP-RK 20 67

Links

Other RWP-RK family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene23043-v1.0-hybrid Fragaria vesca gene23043-v1.0-hybrid N
cassava34925.m1 Manihot esculenta cassava34925.m1 N
cassava34926.m1 Manihot esculenta cassava34926.m1 N
Cucsa.360530 Cucumis sativus Cucsa.360530 N
mgf019664m Mimulus guttatus mgf019664m N
Bostr.28625s0323 Boechera stricta Bostr.28625s0323 N
Cagra.0736s0021 Capsella grandiflora Cagra.0736s0021 N
Carubv10014142m.g Capsella rubella Carubv10014142m.g N
evm.TU.supercontig_25.41 Carica papaya evm.TU.supercontig_25.41 N
cassava2716.m1 Manihot esculenta cassava2716.m1 N
Gorai.011G064500 Gossypium raimondii Gorai.011G064500 N
Lus10002513.g Linum usitatissimum Lus10002513.g N
Lus10003789.g Linum usitatissimum Lus10003789.g N
MDP0000257227 Malus domestica MDP0000257227 N
SapurV1A.0697s0010 Salix purpurea SapurV1A.0697s0010 N
Thhalv10021306m.g Eutrema salsugineum Thhalv10021306m.g N
chr3.CM0049.30.nd Lotus japonicus chr3.CM0049.30.nd N
POPTR_0003s04520 Populus trichocarpa POPTR_0003s04520 N
Bo1g134830 Brassica oleracea Bo1g134830 N
Bo5g132010 Brassica oleracea Bo5g132010 N
Bra021513 Brassica rapa Bra021513 N
LBD22 Arabidopsis lyrata fgenesh2_kg.3__1489__AT3G13850.1 N
GLYMA07G01170 Glycine max GLYMA07G01170 N
GLYMA08G20550 Glycine max GLYMA08G20550 N
PGSC0003DMG400004880 Solanum tuberosum PGSC0003DMG400004880 N
POPTR_0001s20110 Populus trichocarpa POPTR_0001s20110 N
LBD22 Arabidopsis thaliana AT3G13850 N
Solyc06g062630.2 Solanum lycopersicum Solyc06g062630.2 N
TCM_029050 Theobroma cacao TCM_029050 N
TCM_029052 Theobroma cacao TCM_029052 N
Ca_10077 Cicer arietinum Ca_10077 N
Cla015827 Citrullus lanatus Cla015827 N
Pm013344 Prunus mume Pm013344 N
28694.m000665 Ricinus communis 28694.m000665 N