PK19092.1 (Cannabis sativa)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 PK19092.1 T321285_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.918 0.918
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK19092.1 RWP-RK 672 720

Links

Other RWP-RK family TFs
Other Cannabis sativa TFs

414 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
atf-8 Caenorhabditis elegans WBGene00017535 D 0.000
ces-2 Caenorhabditis elegans WBGene00000469 D 0.000
L893_g26459 Steinernema glaseri L893_g26459 I 0.000
BTMF_0000787301 Brugia timori BTMF_0000787301 I 0.000
EEL_0000232301 Elaeophora elaphi EEL_0000232301 I 0.000
Hba_18554 Heterorhabditis bacteriophora Hba_18554 I 0.000
HCOI01537900 Haemonchus contortus HCOI01537900 I 0.000
L596_g3194 Steinernema carpocapsae L596_g3194 I 0.000
L889_g9945 Steinernema feltiae L889_g9945 I 0.000
ASIM_0000214101 Anisakis simplex ASIM_0000214101 I 0.000
L898_g30246 Steinernema monticolum L898_g30246 I 0.000
nAv.1.0.1.g04605 Acanthocheilonema viteae nAv.1.0.1.g04605 I 0.000
nDi.2.2.2.g04619 Dirofilaria immitis nDi.2.2.2.g04619 I 0.000
nLs.2.1.2.g05495 Litomosoides sigmodontis nLs.2.1.2.g05495 I 0.000
SMUV_0001027601 Syphacia muris SMUV_0001027601 I 0.000
SVUK_0000058801 Strongylus vulgaris SVUK_0000058801 I 0.000
TCNE_0000328801 Toxocara canis TCNE_0000328801 I 0.000
CRE13954 Caenorhabditis remanei CRE13954 I 0.000
Bm3413 Brugia malayi Bm3413 I 0.000
CBG19808 Caenorhabditis briggsae CBG19808 I 0.000
CBN01920 Caenorhabditis brenneri CBN01920 I 0.000
CBN02465 Caenorhabditis brenneri CBN02465 I 0.000
CBN32559 Caenorhabditis brenneri CBN32559 I 0.000
CJA08004 Caenorhabditis japonica CJA08004 I 0.000
CJA10655 Caenorhabditis japonica CJA10655 I 0.000
WUBG_00008 Wuchereria bancrofti WUBG_00008 I 0.000
CRE30851 Caenorhabditis remanei CRE30851 I 0.000
WBGene00243299 Onchocerca volvulus WBGene00243299 I 0.000
ACOC_0001241401 Angiostrongylus costaricensis ACOC_0001241401 I 0.000
ANCCAN_03294 Ancylostoma caninum ANCCAN_03294 I 0.000
ANCCEY_09166 Ancylostoma ceylanicum ANCCEY_09166 I 0.000
LOAG_09291 Loa loa LOAG_09291 N 0.000
GPUH_0001881501 Gongylonema pulchrum GPUH_0001881501 N 0.000
EVEC_0000414101 Enterobius vermicularis EVEC_0000414101 N 0.000
TCLT_0000854201 Thelazia callipaeda TCLT_0000854201 N 0.000