CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aire
(
Dipodomys ordii
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
ENSDORG00000004132
T321681_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AIRE
M09375_2.00
Homo sapiens
DHVHCCWWHWNWWCCNND
HNNGGWWNWDWWGGDBDH
Misc
Kulakovskiy et al.(2013)
AIRE_HUMAN.H11MO.0.C
0.956
0.844
AIRE
M11264_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AIRE_01
0.956
0.844
AIRE
M11265_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AIRE_02
0.956
0.844
Aire
M09376_2.00
Mus musculus
DHVHCCWWHWNWWCCNND
HNNGGWWNWDWWGGDBDH
Misc
Kulakovskiy et al.(2013)
AIRE_MOUSE.H11MO.0.C
0.886
0.800
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000003858
SAND
200
244
RGAVEGILIQQVFESGGSKKCIQLGGEFYTPSKCEDPGSHARNKA
Links
Other
SAND
family TFs
Other
Dipodomys ordii
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AIRE
Homo sapiens
ENSG00000160224
D
0.956
Aire
Mus musculus
ENSMUSG00000000731
D
0.904
ENSPANG00000020902
Papio anubis
ENSPANG00000020902
I
0.907
Myotis_brandtii_Aire_10004050
Myotis brandtii
Myotis_brandtii_Aire_10004050
I
0.881
ENSMMUP00000005576
Macaca fascicularis
ENSMMUP00000005576
I
0.907
AIRE
Tupaia belangeri
ENSTBEG00000016828
I
0.921
ENSSTOG00000023870
Ictidomys tridecemlineatus
ENSSTOG00000023870
I
0.902
Aire
Rattus norvegicus
ENSRNOG00000001213
I
0.923
AIRE
Pteropus vampyrus
ENSPVAG00000011010
I
0.925
AIRE
Pan troglodytes
ENSPTRG00000013974
I
0.959
ENSPPYG00000011482
Pongo abelii
ENSPPYG00000011482
I
0.922
AIRE
Procavia capensis
ENSPCAG00000007455
I
0.867
AIRE
Macaca mulatta
ENSMMUG00000004168
I
0.916
ENSMLUG00000010968
Myotis lucifugus
ENSMLUG00000010968
I
0.859
AIRE
Loxodonta africana
ENSLAFG00000008582
I
0.866
AIRE
Gorilla gorilla
ENSGGOG00000005672
I
0.949
AIRE
Felis catus
ENSFCAG00000007933
I
0.859
ENSCSAG00000007836
Chlorocebus sabaeus
ENSCSAG00000007836
I
0.922
AIRE
Cavia porcellus
ENSCPOG00000019868
I
0.974
ENSCJAG00000013748
Callithrix jacchus
ENSCJAG00000013748
N
0.846