GRMZM2G160917 (Zea mays)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GRMZM2G160917 T322624_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.890 0.680
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G160917_P01 SBP 83 158
GRMZM2G160917_P02 SBP 83 158
GRMZM2G160917_P03 SBP 83 158

Links

Other SBP family TFs
Other Zea mays TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KUA1 Arabidopsis thaliana AT5G47390 D
PK00738.1 Cannabis sativa PK00738.1 D
BGIOSGA002232 Oryza indica BGIOSGA002232 I
BGIOSGA018651 Oryza indica BGIOSGA018651 I
Bo1g051550 Brassica oleracea Bo1g051550 I
Bo2g132340 Brassica oleracea Bo2g132340 I
Bo7g105100 Brassica oleracea Bo7g105100 I
Bo8g068220 Brassica oleracea Bo8g068220 I
Bo9g069510 Brassica oleracea Bo9g069510 I
Bra012665 Brassica rapa Bra012665 I
Bra017487 Brassica rapa Bra017487 I
Bra022127 Brassica rapa Bra022127 I
Bra026253 Brassica rapa Bra026253 I
BRADI2G05590 Brachypodium distachyon BRADI2G05590 I
F775_08891 Aegilops tauschii F775_08891 I
F775_18928 Aegilops tauschii F775_18928 I
GLYMA05G04950 Glycine max GLYMA05G04950 I
GLYMA05G36290 Glycine max GLYMA05G36290 I
GLYMA17G15330 Glycine max GLYMA17G15330 I
GRMZM2G176568 Zea mays GRMZM2G176568 I
GRMZM2G400489 Zea mays GRMZM2G400489 I
GSMUA_Achr4G26990_001 Musa acuminata GSMUA_Achr4G26990_001 I
GSMUA_Achr5G15300_001 Musa acuminata GSMUA_Achr5G15300_001 I
GSMUA_Achr6G14820_001 Musa acuminata GSMUA_Achr6G14820_001 I
GSMUA_Achr8G20150_001 Musa acuminata GSMUA_Achr8G20150_001 I
GSMUA_Achr9G05930_001 Musa acuminata GSMUA_Achr9G05930_001 I
GSMUA_AchrUn_randomG03500_001 Musa acuminata GSMUA_AchrUn_randomG03500_001 I
LPERR01G05380 Leersia perrieri LPERR01G05380 I
LPERR05G05230 Leersia perrieri LPERR05G05230 I
MLOC_52982 Hordeum vulgare MLOC_52982 I
MLOC_76271 Hordeum vulgare MLOC_76271 I
MTR_1g033620 Medicago truncatula MTR_1g033620 I
MTR_4g015130 Medicago truncatula MTR_4g015130 I
MTR_4g100630 Medicago truncatula MTR_4g100630 I
MTR_8g101650 Medicago truncatula MTR_8g101650 I
OB01G15640 Oryza brachyantha OB01G15640 I
OB05G15660 Oryza brachyantha OB05G15660 I
OB05G25980 Oryza brachyantha OB05G25980 I
OBART01G05710 Oryza barthii OBART01G05710 I
OBART05G06190 Oryza barthii OBART05G06190 I
OBART05G18640 Oryza barthii OBART05G18640 I
OGLUM01G06250 Oryza glumaepatula OGLUM01G06250 I
OGLUM05G06460 Oryza glumaepatula OGLUM05G06460 I
OLONG_013887 Oryza longistaminata OLONG_013887 I
OLONG_014842 Oryza longistaminata OLONG_014842 I
OMERI01G05960 Oryza meridionalis OMERI01G05960 I
OMERI05G05690 Oryza meridionalis OMERI05G05690 I
ONIVA01G06510 Oryza nivara ONIVA01G06510 I
ONIVA05G06820 Oryza nivara ONIVA05G06820 I
OPUNC01G05570 Oryza punctata OPUNC01G05570 I
OPUNC05G05650 Oryza punctata OPUNC05G05650 I
ORGLA01G0053500 Oryza glaberrima ORGLA01G0053500 I
ORGLA05G0055700 Oryza glaberrima ORGLA05G0055700 I
ORUFI01G06200 Oryza rufipogon ORUFI01G06200 I
ORUFI05G06600 Oryza rufipogon ORUFI05G06600 I
OS01G0187900 Oryza sativa OS01G0187900 I
OS05G0195700 Oryza sativa OS05G0195700 I
PGSC0003DMG400009570 Solanum tuberosum PGSC0003DMG400009570 I
PGSC0003DMG400020344 Solanum tuberosum PGSC0003DMG400020344 I
PGSC0003DMG400020730 Solanum tuberosum PGSC0003DMG400020730 I
PGSC0003DMG400026241 Solanum tuberosum PGSC0003DMG400026241 I
POPTR_0003s07720 Populus trichocarpa POPTR_0003s07720 I
PRUPE_ppa007697mg Prunus persica PRUPE_ppa007697mg I
PRUPE_ppa008493mg Prunus persica PRUPE_ppa008493mg I
Sb03g003150 Sorghum bicolor Sb03g003150 I
Sb03g003270 Sorghum bicolor Sb03g003270 I
Sb09g006060 Sorghum bicolor Sb09g006060 I
Sb09g030390 Sorghum bicolor Sb09g030390 I
scaffold_800056.1 Arabidopsis lyrata scaffold_800056.1 I
Si001941m.g Setaria italica Si001941m.g I
Si022624m.g Setaria italica Si022624m.g I
Si022796m.g Setaria italica Si022796m.g I
Solyc02g082380.1 Solanum lycopersicum Solyc02g082380.1 I
Solyc08g078340.2 Solanum lycopersicum Solyc08g078340.2 I
TCM_015926 Theobroma cacao TCM_015926 I
Traes_1BL_1B12D7856 Triticum aestivum Traes_1BL_1B12D7856 I
TRAES3BF110700030CFD_g Triticum aestivum TRAES3BF110700030CFD_g I
Traes_3DS_DF23FE973 Triticum aestivum Traes_3DS_DF23FE973 I
TRIUR3_09932 Triticum urartu TRIUR3_09932 I
TRIUR3_18966 Triticum urartu TRIUR3_18966 I
VIT_00s0299g00060 Vitis vinifera VIT_00s0299g00060 I
VIT_04s0008g00900 Vitis vinifera VIT_04s0008g00900 I
Ca_03888 Cicer arietinum Ca_03888 I
Ca_12767 Cicer arietinum Ca_12767 I
Cla005714 Citrullus lanatus Cla005714 I
Pm013422 Prunus mume Pm013422 I
Pm023411 Prunus mume Pm023411 I
cassava1864.valid.m1 Manihot esculenta cassava1864.valid.m1 I
cassava4263.m1 Manihot esculenta cassava4263.m1 I
Cucsa.321060 Cucumis sativus Cucsa.321060 I
Cucsa.397260 Cucumis sativus Cucsa.397260 I
mgf017789m Mimulus guttatus mgf017789m I
mgf026007m Mimulus guttatus mgf026007m I
Aquca_002_00032 Aquilegia coerulea Aquca_002_00032 I
Bostr.14419s0032 Boechera stricta Bostr.14419s0032 I
Cagra.1415s0002 Capsella grandiflora Cagra.1415s0002 I
Carubv10026634m.g Capsella rubella Carubv10026634m.g I
Ciclev10009011m.g Citrus clementina Ciclev10009011m.g I
Ciclev10021067m.g Citrus clementina Ciclev10021067m.g I
Eucgr.D02103 Eucalyptus grandis Eucgr.D02103 I
evm.TU.supercontig_89.70 Carica papaya evm.TU.supercontig_89.70 I
gene08868-v1.0-hybrid Fragaria vesca gene08868-v1.0-hybrid I
gene25733-v1.0-hybrid Fragaria vesca gene25733-v1.0-hybrid I
Gorai.003G175300 Gossypium raimondii Gorai.003G175300 I
Gorai.004G196500 Gossypium raimondii Gorai.004G196500 I
Gorai.008G233500 Gossypium raimondii Gorai.008G233500 I
Lus10004384.g Linum usitatissimum Lus10004384.g I
Lus10030813.g Linum usitatissimum Lus10030813.g I
Lus10040181.g Linum usitatissimum Lus10040181.g I
MDP0000074681 Malus domestica MDP0000074681 I
MDP0000132832 Malus domestica MDP0000132832 I
MDP0000136727 Malus domestica MDP0000136727 I
MDP0000233793 Malus domestica MDP0000233793 I
MDP0000255970 Malus domestica MDP0000255970 I
MDP0000522009 Malus domestica MDP0000522009 I
orange1.1g019948m.g Citrus sinensis orange1.1g019948m.g I
orange1.1g038601m.g Citrus sinensis orange1.1g038601m.g I
Pavir.Ca00821 Panicum virgatum Pavir.Ca00821 I
Pavir.Ea00264 Panicum virgatum Pavir.Ea00264 I
Pavir.Eb00103 Panicum virgatum Pavir.Eb00103 I
Pavir.J01328 Panicum virgatum Pavir.J01328 I
Pavir.J19866 Panicum virgatum Pavir.J19866 I
Pavir.J35324 Panicum virgatum Pavir.J35324 I
Pavir.J38363 Panicum virgatum Pavir.J38363 I
SapurV1A.1087s0050 Salix purpurea SapurV1A.1087s0050 I
SapurV1A.1882s0030 Salix purpurea SapurV1A.1882s0030 I
Thhalv10000932m.g Eutrema salsugineum Thhalv10000932m.g I
Thhalv10025432m.g Eutrema salsugineum Thhalv10025432m.g I
chr4.CM0244.480.nc Lotus japonicus chr4.CM0244.480.nc I
LjSGA_143592.1 Lotus japonicus LjSGA_143592.1 I
LjT37H17.80.nd Lotus japonicus LjT37H17.80.nd I
PDK_20s1581271g001 Phoenix dactylifera PDK_20s1581271g001 I
PDK_20s1682301g002 Phoenix dactylifera PDK_20s1682301g002 I
OB01G46940 Oryza brachyantha OB01G46940 N
Traes_1AL_1360F98E7 Triticum aestivum Traes_1AL_1360F98E7 N
PDK_20s1665441g001 Phoenix dactylifera PDK_20s1665441g001 N