Si031154m.g (Setaria italica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Si031154m.g T323054_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.897 0.827
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si031154m SBP 83 157

Links

Other SBP family TFs
Other Setaria italica TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK22320.1 Cannabis sativa PK22320.1 D 0.897
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I 0.895
Pm011381 Prunus mume Pm011381 I 0.894
Cucsa.192470 Cucumis sativus Cucsa.192470 I 0.916
Cucsa.196000 Cucumis sativus Cucsa.196000 I 0.891
gw1.47.180.1 Physcomitrella patens gw1.47.180.1 I 0.891
Aquca_033_00055 Aquilegia coerulea Aquca_033_00055 I 0.894
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.929
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I 0.895
Eucgr.F03303 Eucalyptus grandis Eucgr.F03303 I 0.906
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.894
29983.m003158 Ricinus communis 29983.m003158 I 0.898
MDP0000158607 Malus domestica MDP0000158607 I 0.894
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.898
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.929
Pavir.Fb01917 Panicum virgatum Pavir.Fb01917 I 0.896
SapurV1A.0118s0110 Salix purpurea SapurV1A.0118s0110 I 0.888
SapurV1A.3749s0010 Salix purpurea SapurV1A.3749s0010 I 0.888
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.890
Bo1g129690 Brassica oleracea Bo1g129690 I 0.912
Bo9g137270 Brassica oleracea Bo9g137270 I 0.912
Cla002263 Citrullus lanatus Cla002263 I 0.886
Ca_16243 Cicer arietinum Ca_16243 I 0.888
VIT_19s0014g02350 Vitis vinifera VIT_19s0014g02350 I 0.890
VIT_12s0028g03350 Vitis vinifera VIT_12s0028g03350 I 0.888
TCM_008150 Theobroma cacao TCM_008150 I 0.917
Si032170m.g Setaria italica Si032170m.g I 0.907
Si013151m.g Setaria italica Si013151m.g I 0.896
Cla017596 Citrullus lanatus Cla017596 I 0.916
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I 0.894
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.888
Bra021094 Brassica rapa Bra021094 I 0.912
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.890
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.888
Sb02g034180 Sorghum bicolor Sb02g034180 N 0.949
Pavir.Bb02800 Panicum virgatum Pavir.Bb02800 N 0.976
GRMZM2G067624 Zea mays GRMZM2G067624 N 0.912
GRMZM2G113779 Zea mays GRMZM2G113779 N 0.929
Cucsa.046310 Cucumis sativus Cucsa.046310 N 0.892
AMTR_s00001p00058370 Amborella trichopoda AMTR_s00001p00058370 N 0.889