Pm008474 (Prunus mume)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Pm008474 T323203_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.976 0.853
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.976 0.853
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.976 0.853
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.973 0.880
PRUPE_ppa000682mg
M02478_2.00 		Prunus persica
NNNNGTACGD
HCGTACNNNN		 PBM
Weirauch et al.(2014)
pTH9281 		0.961 0.827
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.961 0.787
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.960 0.840
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.958 0.800
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.957 0.840
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.957 0.840
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.957 0.840
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.956 0.827
SPL3
M07255_2.00 		Arabidopsis thaliana
NGTACGGA
TCCGTACN		 Dap-seq
OMalley et al.(2016)
SPL3_col_a 		0.950 0.707
SPL3
M07256_2.00 		Arabidopsis thaliana
NDNTGTACGGAHN
NDTCCGTACANHN		 Dap-seq
OMalley et al.(2016)
SPL3_colamp_a 		0.950 0.707
SPL3
M02715_2.00 		Arabidopsis thaliana
DDDDDNGTACGKHHHH
DDDDMCGTACNHHHHH		 SELEX
Mathelier et al.(2014)
MA0577.1 		0.950 0.707
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.939 0.693
SPL5
M02474_2.00 		Arabidopsis thaliana
NNGTACGDN
NHCGTACNN		 PBM
Weirauch et al.(2014)
pTH7385 		0.935 0.680
SPL5
M07261_2.00 		Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN		 Dap-seq
OMalley et al.(2016)
SPL5_col_a 		0.935 0.680
SPL5
M07262_2.00 		Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN		 Dap-seq
OMalley et al.(2016)
SPL5_colamp_a 		0.935 0.680
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.934 0.707
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm008474 SBP 148 222

Links

Other SBP family TFs
Other Prunus mume TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CIMG_04934 Coccidioides immitis CIMG_04934 N
MCYG_02430 Microsporum canis MCYG_02430 N
A1O1_00857 Capronia coronata A1O1_00857 N
A1O3_02901 Capronia epimyces A1O3_02901 N
A1O5_03082 Cladophialophora psammophila A1O5_03082 N
A1O7_04095 Cladophialophora yegresii A1O7_04095 N
A1O9_00215 Exophiala aquamarina A1O9_00215 N
ARB_06161 Arthroderma benhamiae ARB_06161 N
BBA_00521 Beauveria bassiana BBA_00521 N
BDDG_02106 Blastomyces dermatitidis BDDG_02106 N
ACLA_030120 Aspergillus clavatus CADACLAG00001678 N
CADAFLAG00002314 Aspergillus flavus CADAFLAG00002314 N
AFUA_1G04550 Aspergillus fumigatus CADAFUAG00009157 N
CADANGAG00000349 Aspergillus niger CADANGAG00000349 N
ANIA_10103 Aspergillus nidulans CADANIAG00002264 N
NFIA_020200 Neosartorya fischeri CADNFIAG00000998 N
CCM_00095 Cordyceps militaris CCM_00095 N
CFIO01_08353 Colletotrichum fioriniae CFIO01_08353 N
CGGC5_8845 Colletotrichum gloeosporioides CGGC5_8845 N
CH063_03229 Colletotrichum higginsianum CH063_03229 N
CMQ_4658 Grosmannia clavigera CMQ_4658 N
Cob_13319 Colletotrichum orbiculare Cob_13319 N
CPC735_069450 Coccidioides posadasii CPC735_069450 N
CPUR_00112 Claviceps purpurea CPUR_00112 N
CSUB01_02897 Colletotrichum sublineola CSUB01_02897 N
EPUS_02925 Endocarpon pusillum EPUS_02925 N
EURHEDRAFT_413306 Aspergillus ruber EURHEDRAFT_413306 N
FFUJ_00508 Fusarium fujikuroi FFUJ_00508 N
FGRRES_00729 Fusarium graminearum FGRRES_00729 N
FOXG_01060 Fusarium oxysporum FOXG_01060 N
FPSE_01400 Fusarium pseudograminearum FPSE_01400 N
FVEG_00454 Fusarium verticillioides FVEG_00454 N
G647_04603 Cladophialophora carrionii G647_04603 N
GGTG_07805 Gaeumannomyces graminis GGTG_07805 N
GLRG_00634 Colletotrichum graminicola GLRG_00634 N
GMDG_02547 Pseudogymnoascus destructans GMDG_02547 N
H101_01603 Trichophyton interdigitale H101_01603 N
H102_03175 Trichophyton rubrum H102_03175 N
H105_03193 Trichophyton soudanense H105_03193 N
HMPREF1120_06620 Exophiala dermatitidis HMPREF1120_06620 N
HMPREF1541_09174 Cyphellophora europaea HMPREF1541_09174 N
M437DRAFT_52225 Aureobasidium melanogenum M437DRAFT_52225 N
M438DRAFT_395502 Aureobasidium pullulans M438DRAFT_395502 N
MAC_07492 Metarhizium acridum MAC_07492 N
MAJ_07143 Metarhizium majus MAJ_07143 N
MAM_03379 Metarhizium album MAM_03379 N
MANI_019755 Metarhizium anisopliae MANI_019755 N
MBR_08071 Metarhizium brunneum MBR_08071 N
MCYG_02430 Arthroderma otae MCYG_02430 N
MGG_01325 Magnaporthe oryzae MGG_01325 N
MGU_03640 Metarhizium guizhouense MGU_03640 N
MGYG_07436 Microsporum gypseum MGYG_07436 N
NechaG75367 Fusarium solani NechaG75367 N
NEUTE1DRAFT_150185 Neurospora tetrasperma NEUTE1DRAFT_150185 N
OCS_05805 Ophiocordyceps sinensis OCS_05805 N
PAAG_11191 Paracoccidioides sp lutzii PAAG_11191 N
PABG_01288 Paracoccidioides brasiliensis PABG_01288 N
PCH_Pc16g09240 Penicillium rubens PCH_Pc16g09240 N
PDE_02914 Penicillium oxalicum PDE_02914 N
PDIP_20560 Penicillium digitatum PDIP_20560 N
PEX1_048030 Penicillium expansum PEX1_048030 N
PITC_020100 Penicillium italicum PITC_020100 N
PMAA_054260 Talaromyces marneffei PMAA_054260 N
PODANS_1_11050 Podospora anserina PODANS_1_11050 N
PV04_05024 Capronia semiimmersa PV04_05024 N
PV05_01390 Exophiala xenobiotica PV05_01390 N
PV06_10373 Exophiala oligosperma PV06_10373 N
PV07_07953 Cladophialophora immunda PV07_07953 N
PV08_10670 Exophiala spinifera PV08_10670 N
PV10_00681 Exophiala mesophila PV10_00681 N
PV11_04222 Exophiala sideris PV11_04222 N
PVAR5_1404 Byssochlamys spectabilis PVAR5_1404 N
S40285_08298 Stachybotrys chlorohalonata S40285_08298 N
S40288_06952 Stachybotrys chartarum S40288_06952 N
SAPIO_CDS5487 Scedosporium apiospermum SAPIO_CDS5487 N
SMAC_02857 Sordaria macrospora SMAC_02857 N
TEQG_05876 Trichophyton equinum TEQG_05876 N
TESG_06104 Trichophyton tonsurans TESG_06104 N
TRIATDRAFT_302680 Trichoderma atroviride TRIATDRAFT_302680 N
TRIREDRAFT_108909 Trichoderma reesei TRIREDRAFT_108909 N
TRIVIDRAFT_208143 Trichoderma virens TRIVIDRAFT_208143 N
TSTA_018670 Talaromyces stipitatus TSTA_018670 N
U727_00434111271 Penicillium solitum U727_00434111271 N
UCRPA7_6165 Togninia minima UCRPA7_6165 N
UREG_06618 Uncinocarpus reesii UREG_06618 N
UV8b_1930 Ustilaginoidea virens UV8b_1930 N
V499_06192 Pseudogymnoascus pannorum V499_06192 N
VHEMI05033 Torrubiella hemipterigena VHEMI05033 N
W97_06384 Coniosporium apollinis W97_06384 N
X797_006248 Metarhizium robertsii X797_006248 N
Z517_11784 Fonsecaea pedrosoi Z517_11784 N
Z518_09874 Rhinocladiella mackenziei Z518_09874 N
Z519_11956 Cladophialophora bantiana Z519_11956 N
estExt_fgenesh3_kg.C_70275 Neurospora discreta estExt_fgenesh3_kg.C_70275 N
fgenesh1_pg.sca_1_chr1_3_0000978 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000978 N
NCU03126 Neurospora crassa NCU03126 N
fgenesh1_pm.00129_#_287 Aspergillus carbonarius fgenesh1_pm.00129_#_287 N
PMAA_054260 Penicillium marneffei PMAA_054260 N
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N
TASK_0000475801 Taenia asiatica TASK_0000475801 N
TsM_000111500 Taenia solium TsM_000111500 N
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N