30174.m008805 (Ricinus communis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 30174.m008805 T323227_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.945 0.760
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.937 0.720
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.928 0.733
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.928 0.733
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.928 0.733
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.908 0.733
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.907 0.720
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.906 0.707
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.906 0.707
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.906 0.707
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.905 0.693
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.899 0.720
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.895 0.693
PRUPE_ppa000682mg
M02478_2.00 		Prunus persica
NNNNGTACGD
HCGTACNNNN		 PBM
Weirauch et al.(2014)
pTH9281 		0.887 0.707
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30174.m008805 SBP 168 242

Links

Other SBP family TFs
Other Ricinus communis TFs

451 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AEPI009163 Anopheles epiroticus AEPI009163 N
YQE_05996 Dendroctonus ponderosae YQE_05996 N
Cflo_10168--XP_001121257.1_APIME Camponotus floridanus Cflo_10168--XP_001121257.1_APIME N
Hsal_12949--XP_001121257.1_APIME Harpegnathos saltator Hsal_12949--XP_001121257.1_APIME N
LCUP006788 Lucilia cuprina LCUP006788 N
LDEC010382 Leptinotarsa decemlineata LDEC010382 N
AALB005154 Anopheles albimanus AALB005154 N
AARA008073 Anopheles arabiensis AARA008073 N
AATE010620 Anopheles atroparvus AATE010620 N
ACHR007846 Anopheles christyi ACHR007846 N
ACOM025729 Anopheles coluzzii ACOM025729 N
ACUA011324 Anopheles culicifacies ACUA011324 N
ADIR007209 Anopheles dirus ADIR007209 N
SINV17602 Solenopsis invicta SINV17602 N
AFAF000142 Anopheles farauti AFAF000142 N
AFUN009303 Anopheles funestus AFUN009303 N
AMEC020556 Anopheles melas AMEC020556 N
AMEM007399 Anopheles merus AMEM007399 N
AMIN010420 Anopheles minimus AMIN010420 N
AQUA004418 Anopheles quadriannulatus AQUA004418 N
ASIS022980 Anopheles sinensis ASIS022980 N
ASTEI01417 Anopheles stephensi ASTEI01417 N
LLOJ005741 Lutzomyia longipalpis LLOJ005741 N
MDOA004758 Musca domestica MDOA004758 N
PPAI006116 Phlebotomus papatasi PPAI006116 N
GI21731 Drosophila mojavensis FBgn0144461 N
AAEL018175 Aedes aegypti AAEL018175 N
ACEP10253 Atta cephalotes ACEP10253 N
ADAC007302 Anopheles darlingi ADAC007302 N
AGAP007503 Anopheles gambiae AGAP007503 N
BGIBMGA004976 Bombyx mori BGIBMGA004976 N
CPIJ008611 Culex quinquefasciatus CPIJ008611 N
GA20228 Drosophila pseudoobscura FBgn0080223 N
CG34422 Drosophila melanogaster FBgn0085451 N
GF19054 Drosophila ananassae FBgn0096066 N
GG19191 Drosophila erecta FBgn0111397 N
GH17861 Drosophila grimshawi FBgn0125330 N
CpipJ_CPIJ008611 Culex pipiens CpipJ_CPIJ008611 N
GM18724 Drosophila sechellia FBgn0173629 N
GD17413 Drosophila simulans FBgn0188968 N
GJ19112 Drosophila virilis FBgn0206257 N
GK19784 Drosophila willistoni FBgn0221782 N
GE17754 Drosophila yakuba FBgn0235199 N
GB42021 Apis mellifera GB42021 N
HMEL004731 Heliconius melpomene HMEL004731 N
L798_03938 Zootermopsis nevadensis L798_03938 N
MCINX003187 Melitaea cinxia MCINX003187 N
NV11270 Nasonia vitripennis NV11270 N
PIIN_01020 Piriformospora indica PIIN_01020 N