CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ab00499
(
Panicum virgatum
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
Pavir.Ab00499
T323612_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ab00499.1.p
SBP
61
135
CQVEGCGLELGTAKDYHRKHRVCEAHTKCPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLSDHNARRRKP
Links
Other
SBP
family TFs
Other
Panicum virgatum
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGUG_01009
Meyerozyma guilliermondii
PGUG_01009
N
Kwal_2526
Kluyveromyces waltii
Kwal_2526
N
KLTH0H10494g
Kluyveromyces thermotolerans
KLTH0H10494g
N
estExt_fgenesh1_pg.C_chr_4.10127
Pichia stipitis
estExt_fgenesh1_pg.C_chr_4.10127
N
Z517_00692
Fonsecaea pedrosoi
Z517_00692
N
SPAPADRAFT_71207
Spathaspora passalidarum
SPAPADRAFT_71207
N
PV10_07750
Exophiala mesophila
PV10_07750
N
PV07_03969
Cladophialophora immunda
PV07_03969
N
PV04_06122
Capronia semiimmersa
PV04_06122
N
PICST_67483
Scheffersomyces stipitis
PICST_67483
N
CLUG_00032
Candida lusitaniae
CLUG_00032
N
LELG_00993
Lodderomyces elongisporus
LELG_00993
N
LALA0_S07e07756g
Lachancea lanzarotensis
LALA0_S07e07756g
N
HMPREF1120_08485
Exophiala dermatitidis
HMPREF1120_08485
N
FGRRES_01915
Fusarium graminearum
FGRRES_01915
N
CLUG_00032
Clavispora lusitaniae
CLUG_00032
N
A1O3_01321
Capronia epimyces
A1O3_01321
N
A1O1_04095
Capronia coronata
A1O1_04095
N
PGUG_01009
Candida guilliermondii
PGUG_01009
N