Pavir.Bb02800 (Panicum virgatum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Pavir.Bb02800 T323620_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb02800.1.p SBP 88 162

Links

Other SBP family TFs
Other Panicum virgatum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si013151m.g Setaria italica Si013151m.g I 0.902
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I 0.891
Pavir.Fb01917 Panicum virgatum Pavir.Fb01917 I 0.902
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.916
Eucgr.F03303 Eucalyptus grandis Eucgr.F03303 I 0.890
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.916
Cucsa.192470 Cucumis sativus Cucsa.192470 I 0.901
Cla017596 Citrullus lanatus Cla017596 I 0.901
Cla002263 Citrullus lanatus Cla002263 I 0.904
TCM_008150 Theobroma cacao TCM_008150 I 0.906
Solyc07g053810.2 Solanum lycopersicum Solyc07g053810.2 I 0.891
Si032170m.g Setaria italica Si032170m.g I 0.891
Si031154m.g Setaria italica Si031154m.g I 0.976
AMTR_s00062p00211520 Amborella trichopoda AMTR_s00062p00211520 I 0.891
Sb07g027420 Sorghum bicolor Sb07g027420 I 0.890
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I 0.891
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I 0.893
GRMZM2G169270 Zea mays GRMZM2G169270 I 0.892
GRMZM2G098557 Zea mays GRMZM2G098557 I 0.890
Bra021094 Brassica rapa Bra021094 I 0.900
Bo9g137270 Brassica oleracea Bo9g137270 I 0.900
Bo1g129690 Brassica oleracea Bo1g129690 I 0.900
Sb02g034180 Sorghum bicolor Sb02g034180 N 0.939
GRMZM2G113779 Zea mays GRMZM2G113779 N 0.915
GRMZM2G067624 Zea mays GRMZM2G067624 N 0.897