Thhalv10007832m.g (Eutrema salsugineum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Thhalv10007832m.g T323683_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL11
M02471_2.00 		Arabidopsis thaliana
NNNHGTACGGWN
NWCCGTACDNNN		 PBM
Weirauch et al.(2014)
pTH9392 		0.982 0.933
SPL11
M07254_2.00 		Arabidopsis thaliana
HTGTACTDDHH
DDHHAGTACAD		 Dap-seq
OMalley et al.(2016)
SPL11_col100_a 		0.982 0.933
SPL10
M01084_2.00 		Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN		 PBM
Sullivan et al.(2014)
pTH9749 		0.981 0.933
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10007828m SBP 175 249
Thhalv10007832m SBP 175 249

Links

Other SBP family TFs
Other Eutrema salsugineum TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CCM_09227 Cordyceps militaris CCM_09227 I 0.000
OIDMADRAFT_204080 Oidiodendron maius OIDMADRAFT_204080 I 0.000
U727_00430311331 Penicillium solitum U727_00430311331 N 0.000
PMAA_073800 Talaromyces marneffei PMAA_073800 N 0.000
PV04_03384 Capronia semiimmersa PV04_03384 N 0.000
PV09_04169 Verruconis gallopava PV09_04169 N 0.000
SPBR_02468 Sporothrix brasiliensis SPBR_02468 N 0.000
SS1G_02054 Sclerotinia sclerotiorum SS1G_02054 N 0.000
TRIVIDRAFT_149245 Trichoderma virens TRIVIDRAFT_149245 N 0.000
TRIVIDRAFT_189391 Trichoderma virens TRIVIDRAFT_189391 N 0.000
PEX1_099950 Penicillium expansum PEX1_099950 N 0.000
V499_06431 Pseudogymnoascus pannorum V499_06431 N 0.000
VHEMI09976 Torrubiella hemipterigena VHEMI09976 N 0.000
X797_011070 Metarhizium robertsii X797_011070 N 0.000
fgenesh1_pg.sca_12_chr5_2_0000282 Nectria haematococca fgenesh1_pg.sca_12_chr5_2_0000282 N 0.000
fgenesh1_pg.sca_12_chr5_2_0000331 Nectria haematococca fgenesh1_pg.sca_12_chr5_2_0000331 N 0.000
Pc13g06530 Penicillium chrysogenum Pc13g06530 N 0.000
PMAA_073800 Penicillium marneffei PMAA_073800 N 0.000
PITC_065540 Penicillium italicum PITC_065540 N 0.000
NFIA_072260 Neosartorya fischeri CADNFIAG00006741 N 0.000
PCH_Pc13g06530 Penicillium rubens PCH_Pc13g06530 N 0.000
OIDMADRAFT_45112 Oidiodendron maius OIDMADRAFT_45112 N 0.000
NechaG80151 Fusarium solani NechaG80151 N 0.000
NechaG80102 Fusarium solani NechaG80102 N 0.000
LEMA_P109100.1 Leptosphaeria maculans LEMA_P109100.1 N 0.000
HMPREF1541_05522 Cyphellophora europaea HMPREF1541_05522 N 0.000
GGTG_09020 Gaeumannomyces graminis GGTG_09020 N 0.000
G647_05188 Cladophialophora carrionii G647_05188 N 0.000
FPSE_08824 Fusarium pseudograminearum FPSE_08824 N 0.000
FOXG_08746 Fusarium oxysporum FOXG_08746 N 0.000
FFUJ_08424 Fusarium fujikuroi FFUJ_08424 N 0.000
CGGC5_7571 Colletotrichum gloeosporioides CGGC5_7571 N 0.000
CCM_01638 Cordyceps militaris CCM_01638 N 0.000