Bo4g120510 (Brassica oleracea)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Bo4g120510 T323773_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g120510.1 Sigma 70 327 397

Links

Other Sigma 70 family TFs
Other Brassica oleracea TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK06453.1 Cannabis sativa PK06453.1 I
PYU1_G002849 Pythium ultimum PYU1_G002849 I
maker-pir_contig_548-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.3 I
maker-piw_contig_637-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_637-fgenesh-gene-0.5 I
maker-piw_contig_1647-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_1647-fgenesh-gene-0.1 N
fgenesh1_pg.C_scaffold_11000265 Phytophthora capsici fgenesh1_pg.C_scaffold_11000265 N
PYU1_G003099 Pythium ultimum PYU1_G003099 N
PYU1_G003089 Pythium ultimum PYU1_G003089 N
PYU1_G002847 Pythium ultimum PYU1_G002847 N
Physo131337 Phytophthora sojae Physo131337 N
Phyra73321 Phytophthora ramorum Phyra73321 N
maker-pve_contig_364-fgenesh-gene-0.6 Pythium vexans maker-pve_contig_364-fgenesh-gene-0.6 N
maker-piw_contig_4506-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_4506-fgenesh-gene-0.0 N
maker-piw_contig_1647-snap-gene-0.3 Pythium iwayamai maker-piw_contig_1647-snap-gene-0.3 N
ALNC14_029500 Albugo laibachii ALNC14_029500 N
maker-pir_contig_945-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_945-fgenesh-gene-0.0 N
maker-pir_contig_524-snap-gene-0.12 Pythium irregulare maker-pir_contig_524-snap-gene-0.12 N
maker-pir_contig_516-fgenesh-gene-0.8 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.8 N
maker-pir_contig_1094-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_1094-fgenesh-gene-0.0 N
maker-pag1_scaffold_154-snap-gene-0.26 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.26 N
maker-pag1_scaffold_154-snap-gene-0.25 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.25 N
fgenesh_scip_prom.46568.7327 Phytophthora kernoviae fgenesh_scip_prom.46568.7327 N
fgenesh_scip_prom.28083.3853 Phytophthora lateralis fgenesh_scip_prom.28083.3853 N
F443_16339 Phytophthora parasitica F443_16339 N
F443_03239 Phytophthora parasitica F443_03239 N