CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G14567
(
Brachypodium distachyon
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
BRADI2G14567
T323791_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G14567.1
Sigma 70
313
379
TTEWLVKYIARTYTGMGTAFEDLLQAGKMGVLNGADRFDSNKGCKFSTYVKYWIRKAMLALLAENSG
Links
Other
Sigma 70
family TFs
Other
Brachypodium distachyon
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC05G25360
Oryza punctata
OPUNC05G25360
N
0.910
Pavir.J05536
Panicum virgatum
Pavir.J05536
N
0.896
Pavir.J02804
Panicum virgatum
Pavir.J02804
N
0.896
TRIUR3_15558
Triticum urartu
TRIUR3_15558
N
0.925
Traes_1DL_F23E9DAA9
Triticum aestivum
Traes_1DL_F23E9DAA9
N
0.925
Traes_1BL_3E662FC82
Triticum aestivum
Traes_1BL_3E662FC82
N
0.925
Traes_1AL_2F1278623
Triticum aestivum
Traes_1AL_2F1278623
N
0.925
Si021619m.g
Setaria italica
Si021619m.g
N
0.896
Sb09g030380
Sorghum bicolor
Sb09g030380
N
0.781
Sb09g030350
Sorghum bicolor
Sb09g030350
N
0.821
OS05G0589200
Oryza sativa
OS05G0589200
N
0.925
ORUFI05G29710
Oryza rufipogon
ORUFI05G29710
N
0.925
ORGLA05G0241100
Oryza glaberrima
ORGLA05G0241100
N
0.925
BGIOSGA020470
Oryza indica
BGIOSGA020470
N
0.925
ONIVA05G29730
Oryza nivara
ONIVA05G29730
N
0.925
OMERI05G23660
Oryza meridionalis
OMERI05G23660
N
0.925
OLONG_010405
Oryza longistaminata
OLONG_010405
N
0.925
OGLUM05G29230
Oryza glumaepatula
OGLUM05G29230
N
0.925
OBART05G27740
Oryza barthii
OBART05G27740
N
0.925
OB05G35290
Oryza brachyantha
OB05G35290
N
0.910
MLOC_12452
Hordeum vulgare
MLOC_12452
N
0.925
LPERR05G23430
Leersia perrieri
LPERR05G23430
N
0.910
GRMZM5G830932
Zea mays
GRMZM5G830932
N
0.851
F775_05183
Aegilops tauschii
F775_05183
N
0.925
BRADI2G14550
Brachypodium distachyon
BRADI2G14550
N
0.940