MLOC_12452 (Hordeum vulgare)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 MLOC_12452 T323872_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_12452.1 Sigma 70 347 413
MLOC_12452.2 Sigma 70 394 460
MLOC_12452.3 Sigma 70 60 127
MLOC_12452.4 Sigma 70 60 127
MLOC_12452.5 Sigma 70 346 412
MLOC_12452.6 Sigma 70 394 460

Links

Other Sigma 70 family TFs
Other Hordeum vulgare TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC05G25360 Oryza punctata OPUNC05G25360 N 0.896
Pavir.J05536 Panicum virgatum Pavir.J05536 N 0.910
Pavir.J02804 Panicum virgatum Pavir.J02804 N 0.910
TRIUR3_15558 Triticum urartu TRIUR3_15558 N 1.000
Traes_1DL_F23E9DAA9 Triticum aestivum Traes_1DL_F23E9DAA9 N 1.000
Traes_1BL_3E662FC82 Triticum aestivum Traes_1BL_3E662FC82 N 0.985
Traes_1AL_2F1278623 Triticum aestivum Traes_1AL_2F1278623 N 1.000
Si021619m.g Setaria italica Si021619m.g N 0.910
Sb09g030380 Sorghum bicolor Sb09g030380 N 0.797
Sb09g030350 Sorghum bicolor Sb09g030350 N 0.836
OS05G0589200 Oryza sativa OS05G0589200 N 0.910
ORUFI05G29710 Oryza rufipogon ORUFI05G29710 N 0.910
ORGLA05G0241100 Oryza glaberrima ORGLA05G0241100 N 0.910
BGIOSGA020470 Oryza indica BGIOSGA020470 N 0.910
ONIVA05G29730 Oryza nivara ONIVA05G29730 N 0.910
OMERI05G23660 Oryza meridionalis OMERI05G23660 N 0.910
OLONG_010405 Oryza longistaminata OLONG_010405 N 0.910
OGLUM05G29230 Oryza glumaepatula OGLUM05G29230 N 0.910
OBART05G27740 Oryza barthii OBART05G27740 N 0.910
OB05G35290 Oryza brachyantha OB05G35290 N 0.909
LPERR05G23430 Leersia perrieri LPERR05G23430 N 0.939
GRMZM5G830932 Zea mays GRMZM5G830932 N 0.866
F775_05183 Aegilops tauschii F775_05183 N 1.000
BRADI2G14567 Brachypodium distachyon BRADI2G14567 N 0.925
BRADI2G14550 Brachypodium distachyon BRADI2G14550 N 0.941