CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS08G0242800
(
Oryza sativa
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
OS08G0242800
T323935_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS08T0242800-01
Sigma 70
337
407
MARSNFRLVIHVARKYEGYGLDIQDLVQDGCSGLMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRL
OS08T0242800-02
Sigma 70
337
407
MARSNFRLVIHVARKYEGYGLDIQDLVQDGCSGLMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRL
Links
Other
Sigma 70
family TFs
Other
Oryza sativa
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_03769
Aspergillus nidulans
CADANIAG00004949
D
MAJ_08664
Metarhizium majus
MAJ_08664
I
MANI_010873
Metarhizium anisopliae
MANI_010873
I
MBR_08535
Metarhizium brunneum
MBR_08535
I
S40285_07224
Stachybotrys chlorohalonata
S40285_07224
I
S40288_05556
Stachybotrys chartarum
S40288_05556
I
TRIATDRAFT_182375
Trichoderma atroviride
TRIATDRAFT_182375
I
TRIREDRAFT_3605
Trichoderma reesei
TRIREDRAFT_3605
I
TRIVIDRAFT_124610
Trichoderma virens
TRIVIDRAFT_124610
I
X797_010537
Metarhizium robertsii
X797_010537
I
MAC_06259
Metarhizium acridum
MAC_06259
N