CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm016510
(
Prunus mume
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
Pm016510
T324061_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm016510
Sigma 70
207
277
IIRSYRGLVVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHERKWKLSTYVYWWIRQAIIRAIENKSRI
Links
Other
Sigma 70
family TFs
Other
Prunus mume
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BAUCODRAFT_144905
Baudoinia compniacensis
BAUCODRAFT_144905
N
0.000
DOTSEDRAFT_67992
Dothistroma septosporum
DOTSEDRAFT_67992
N
0.000
M438DRAFT_343467
Aureobasidium pullulans
M438DRAFT_343467
N
0.000
MYCFIDRAFT_55893
Pseudocercospora fijiensis
MYCFIDRAFT_55893
N
0.000
Mycgr3G57911
Zymoseptoria tritici
Mycgr3G57911
N
0.000
SEPMUDRAFT_146766
Sphaerulina musiva
SEPMUDRAFT_146766
N
0.000
estExt_Genewise1.C_chr_40669
Mycosphaerella graminicola
estExt_Genewise1.C_chr_40669
N
0.000
estExt_Genewise1Plus.C_13626
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_13626
N
0.000