CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.2902s0107
(
Boechera stricta
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
Bostr.2902s0107
T324154_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.2902s0107.1.p
Sigma 70
184
254
ITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIAHKSRL
Links
Other
Sigma 70
family TFs
Other
Boechera stricta
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCYG_08710
Microsporum canis
MCYG_08710
N
0.000
ACRE_069230
Acremonium chrysogenum
ACRE_069230
N
0.000
BDDG_07110
Blastomyces dermatitidis
BDDG_07110
N
0.000
ACLA_088930
Aspergillus clavatus
CADACLAG00008857
N
0.000
CH063_13215
Colletotrichum higginsianum
CH063_13215
N
0.000
CHGG_00926
Chaetomium globosum
CHGG_00926
N
0.000
COCC4DRAFT_64454
Bipolaris maydis
COCC4DRAFT_64454
N
0.000
HCBG_05651
Histoplasma capsulatum
HCBG_05651
N
0.000
MCYG_08710
Arthroderma otae
MCYG_08710
N
0.000
MPH_11049
Macrophomina phaseolina
MPH_11049
N
0.000
PEX1_051210
Penicillium expansum
PEX1_051210
N
0.000
PITC_016440
Penicillium italicum
PITC_016440
N
0.000
S40285_04043
Stachybotrys chlorohalonata
S40285_04043
N
0.000
SAPIO_CDS3191
Scedosporium apiospermum
SAPIO_CDS3191
N
0.000
SBOR_2893
Sclerotinia borealis
SBOR_2893
N
0.000
TSTA_058560
Talaromyces stipitatus
TSTA_058560
N
0.000