orange1.1g008352m.g (Citrus sinensis)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 orange1.1g008352m.g T324222_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g008352m Sigma 70 333 403
orange1.1g008556m Sigma 70 325 395
orange1.1g008652m Sigma 70 322 392
orange1.1g009567m Sigma 70 296 366
orange1.1g011324m Sigma 70 333 403
orange1.1g011577m Sigma 70 333 403
orange1.1g011992m Sigma 70 333 383
orange1.1g014193m Sigma 70 333 403
orange1.1g014241m Sigma 70 333 402
orange1.1g017044m Sigma 70 333 362
orange1.1g018065m Sigma 70 333 361

Links

Other Sigma 70 family TFs
Other Citrus sinensis TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GA21620 Drosophila pseudoobscura FBgn0081605 N
GG19391 Drosophila erecta FBgn0111594 N
GI15637 Drosophila mojavensis FBgn0138386 N
GK20036 Drosophila willistoni FBgn0222033 N
GE16037 Drosophila yakuba FBgn0233588 N