CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK06863.1
(
Cannabis sativa
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
PK06863.1
T324271_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK06863.1
Sigma 70
103
173
ITRSYKRLVSSIASGYQGKGLTFQDLIQEGSIGLLRGAHKFDPHKGYKLSTYVYWWIRQAIIKAIQKKSRM
Links
Other
Sigma 70
family TFs
Other
Cannabis sativa
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SNOG_04998
Stagonospora nodorum
SNOG_04998
N
0.000
A1O5_08836
Cladophialophora psammophila
A1O5_08836
N
0.000
CADANGAG00005079
Aspergillus niger
CADANGAG00005079
N
0.000
CADANGAG00009517
Aspergillus niger
CADANGAG00009517
N
0.000
CFIO01_00932
Colletotrichum fioriniae
CFIO01_00932
N
0.000
DEHA2D00770g
Debaryomyces hansenii
DEHA2D00770g
N
0.000
PEX1_096160
Penicillium expansum
PEX1_096160
N
0.000
PV04_05906
Capronia semiimmersa
PV04_05906
N
0.000
SNOG_04998
Phaeosphaeria nodorum
SNOG_04998
N
0.000
fgenesh1_pg.00868_#_80
Aspergillus carbonarius
fgenesh1_pg.00868_#_80
N
0.000