Sakowv30001112m.g (Saccoglossus kowalevskii)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 Sakowv30001112m.g T325369_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Med
M06447_2.00 		Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM		 B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655 		0.776 0.776
Med
M09693_2.00 		Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR		 Misc
Kulakovskiy et al.(2009)
Med 		0.776 0.776
Smad4
M05889_2.00 		Mus musculus
KCYAGACR
YGTCTRGM		 SMiLE-seq
Isakova et al.(2017)
Smad4 		0.746 0.746
SMAD4
M09377_2.00 		Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH		 Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B 		0.746 0.746
Smad4
M09382_2.00 		Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH		 Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A 		0.746 0.746
SMAD4
M09634_2.00 		Homo sapiens
NNNYGTCTGS
SCAGACRNNN		 Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422 		0.746 0.746
SMAD4
M11275_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q4 		0.746 0.746
SMAD4
M11276_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6_01 		0.746 0.746
SMAD4
M11277_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6 		0.746 0.746
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23935084_peptide SMAD 31 97

Links

Other SMAD family TFs
Other Saccoglossus kowalevskii TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Q86SD7_PODCA Podocoryne carnea Q86SD7_PODCA D 0.000
HmN_000028700 Hymenolepis microstoma HmN_000028700 I 0.000
TTAC_0000915701 Hydatigera taeniaeformis TTAC_0000915701 I 0.000
TsM_000892700 Taenia solium TsM_000892700 I 0.000
TsM_000611800 Taenia solium TsM_000611800 I 0.000
TASK_0000469001 Taenia asiatica TASK_0000469001 I 0.000
SSTP_0000092200 Strongyloides stercoralis SSTP_0000092200 I 0.000
SPER_0003105501 Spirometra erinaceieuropaei SPER_0003105501 I 0.000
SPER_0001880401 Spirometra erinaceieuropaei SPER_0001880401 I 0.000
PTRK_0000181700 Parastrongyloides trichosuri PTRK_0000181700 I 0.000
nRc.2.0.1.g30457 Romanomermis culicivorax nRc.2.0.1.g30457 I 0.000
L898_g2678 Steinernema monticolum L898_g2678 I 0.000
L889_g7378 Steinernema feltiae L889_g7378 I 0.000
L596_g14232 Steinernema carpocapsae L596_g14232 I 0.000
EmuJ_000915650 Echinococcus multilocularis EmuJ_000915650 I 0.000
ECPE_0001225801 Echinostoma caproni ECPE_0001225801 I 0.000
ECANG7_06581 Echinococcus canadensis ECANG7_06581 I 0.000
DILT_0000534401 Diphyllobothrium latum DILT_0000534401 I 0.000
BXY_0622200 Bursaphelenchus xylophilus BXY_0622200 I 0.000
ASIM_0001224701 Anisakis simplex ASIM_0001224701 I 0.000
MCINX005605 Melitaea cinxia MCINX005605 I 0.000
KGM_13131 Danaus plexippus KGM_13131 I 0.000
HMEL025049 Heliconius melpomene HMEL025049 I 0.000
HelroG138724 Helobdella robusta HelroG138724 I 0.000
ENSONIG00000018347 Oreochromis niloticus ENSONIG00000018347 I 0.000
BN946_scf184355.g3 Trametes cinnabarina BN946_scf184355.g3 I 0.000
Aqu1.227096 Amphimedon queenslandica Aqu1.227096 N 0.000
RSKR_0000821700 Rhabditophanes kr3021 RSKR_0000821700 N 0.000
SVE_0701500 Strongyloides venezuelensis SVE_0701500 N 0.000