CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_08937
(
Verticillium albo atrum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
VDBG_08937
T326164_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_08937T0
Sox
116
171
ALQKTREDKPDEDATHTIEEELARGWKDLSDDAKEAFQSRYDDALAQYQKDKAEYD
Links
Other
Sox
family TFs
Other
Verticillium albo atrum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_00827
Aegilops tauschii
F775_00827
I
0.000
Traes_5BL_027509D0D
Triticum aestivum
Traes_5BL_027509D0D
N
0.000
Traes_5BL_6647931E2
Triticum aestivum
Traes_5BL_6647931E2
N
0.000
Pavir.J19655
Panicum virgatum
Pavir.J19655
N
0.000