Bcin09g02870 (Botrytis cinerea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Bcin09g02870 T326536_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.494 0.493
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.494 0.493
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.494 0.493
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.494 0.493
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.494 0.493
Sox12
M00205_2.00 		Mus musculus
HWTTGTBNNN
NNNVACAAWD		 PBM
Badis et al.(2009)
Sox12_3957 		0.448 0.362
SOX12
M05789_2.00 		Homo sapiens
NATTGTTCGGK
MCCGAACAATN		 SELEX
Yin et al.(2017)
SOX12_eDBD_HT-SELEX 		0.448 0.362
SOX12
M05790_2.00 		Homo sapiens
YATTGTTCBKT
AMVGAACAATR		 SELEX
Yin et al.(2017)
SOX12_eDBD_Methyl-HT-SELEX 		0.448 0.362
Sox15
M00202_2.00 		Mus musculus
WTTVWNNNN
NNNNWBAAW		 PBM
Badis et al.(2009)
Sox15_3457 		0.447 0.348
SOX15
M03508_2.00 		Homo sapiens
AACAATAMCATTGTT
AACAATGKTATTGTT		 SELEX
Jolma et al.(2013)
SOX15_1 		0.447 0.348
SOX15
M03509_2.00 		Homo sapiens
ATCAATAMCATTGAT
ATCAATGKTATTGAT		 SELEX
Jolma et al.(2013)
SOX15_2 		0.447 0.348
SOX15
M03510_2.00 		Homo sapiens
ATGAATAACATTCAT
ATGAATGTTATTCAT		 SELEX
Jolma et al.(2013)
SOX15_3 		0.447 0.348
SOX15
M05893_2.00 		Homo sapiens
YYWTTGTNHN
NDNACAAWRR		 SMiLE-seq
Isakova et al.(2017)
SOX15 		0.447 0.348
SOX15
M11308_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX15_Q3 		0.447 0.348
mat1-Mc
M11340_2.00 		Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN		 Transfac
Matys et al.(2006)
F$MAT1MC_01 		0.442 0.391
mat1-Mc
M11341_2.00 		Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR		 Transfac
Matys et al.(2006)
F$MAT1MC_02 		0.442 0.391
ste11
M11342_2.00 		Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH		 Transfac
Matys et al.(2006)
F$STE11_01 		0.437 0.362
ste11
M11343_2.00 		Schizosaccharomyces pombe Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$STE11_02 		0.437 0.362
egl-13
M00710_2.00 		Caenorhabditis elegans
NNAACAATWN
NWATTGTTNN		 PBM
Narasimhan et al.(2015)
pTH9125 		0.434 0.290
Sox102F
M03981_2.00 		Drosophila melanogaster
ATTGTTCGGTGKN
NMCACCGAACAAT		 SELEX
Nitta et al.(2015)
Sox102F_1 		0.434 0.290
Sox102F
M03982_2.00 		Drosophila melanogaster
NAACAATDDCATTGTTN
NAACAATGHHATTGTTN		 SELEX
Nitta et al.(2015)
Sox102F_2 		0.434 0.290
SOX4
M01026_2.00 		Homo sapiens
AACAAWGR
YCWTTGTT		 PBM
Scharer et al.(2009)
Sox4 		0.419 0.348
SOX4
M03496_2.00 		Homo sapiens
NAACAATTKCAGTGTT
AACACTGMAATTGTTN		 SELEX
Jolma et al.(2013)
SOX4_1 		0.419 0.348
SOX4
M05765_2.00 		Homo sapiens
NRACAAWGVV
BBCWTTGTYN		 SELEX
Yin et al.(2017)
SOX4_eDBD_HT-SELEX 		0.419 0.348
SOX4
M09388_2.00 		Homo sapiens
BYCTTTGTYYBB
VVRRACAAAGRV		 Misc
Kulakovskiy et al.(2013)
SOX4_HUMAN.H11MO.0.B 		0.419 0.348
SOX4
M11301_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q3 		0.419 0.348
SOX4
M11302_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q5_02 		0.419 0.348
SOX4
M11303_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q5 		0.419 0.348
SOX4
M05766_2.00 		Homo sapiens
NRACAAWGVV
BBCWTTGTYN		 SELEX
Yin et al.(2017)
SOX4_eDBD_Methyl-HT-SELEX 		0.419 0.348
Sox11
M00210_2.00 		Mus musculus
WTTGTBNNN
NNNVACAAW		 PBM
Badis et al.(2009)
Sox11_2266 		0.419 0.333
Sox4
M00213_2.00 		Mus musculus
NNVACAAWD
HWTTGTBNN		 PBM
Badis et al.(2009)
Sox4_2941 		0.419 0.333
Sox11
M03541_2.00 		Mus musculus
AACAATTKCAGTGTT
AACACTGMAATTGTT		 SELEX
Jolma et al.(2013)
Sox11_1 		0.419 0.333
Sox4
M09410_2.00 		Mus musculus
BYCTTTGTYYBB
VVRRACAAAGRV		 Misc
Kulakovskiy et al.(2013)
SOX4_MOUSE.H11MO.0.A 		0.419 0.333
Sox4
M09641_2.00 		Mus musculus
BCWTTGTYCN
NGRACAAWGV		 Misc
Heinz et al.(2010)
proB-Sox4_GSE50066 		0.419 0.333
SOX11
M11326_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX11_Q6 		0.419 0.333
sem-2
M02488_2.00 		Caenorhabditis elegans
NNNHVNNNNN
NNNNNBDNNN		 PBM
Weirauch et al.(2014)
pTH9043 		0.417 0.333
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bcin09g02870.1 Sox 113 181

Links

Other Sox family TFs
Other Botrytis cinerea TFs

Invalid Input OrderBy

847 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action