CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIBMGA006998
(
Bombyx mori
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
BGIBMGA006998
T326570_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA006998-TA
Sox
138
211
PKKPCNAFFQFCQEQRPLVVAEANSEVGAEPSKQEVTRQLASRWRALTNDEKRVYVAMFERSKEKYAEEMTAYN
Links
Other
Sox
family TFs
Other
Bombyx mori
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPRG_05687
Saprolegnia parasitica
SPRG_05687
N
ALNC14_062100
Albugo laibachii
ALNC14_062100
N
fgenesh_scip_prom.28083.8529
Phytophthora lateralis
fgenesh_scip_prom.28083.8529
N
fgenesh_scip_prom.46568.7146
Phytophthora kernoviae
fgenesh_scip_prom.46568.7146
N
HpaG808215
Hyaloperonospora arabidopsidis
HpaG808215
N
maker-pag1_scaffold_204-fgenesh-gene-0.5
Pythium aphanidermatum
maker-pag1_scaffold_204-fgenesh-gene-0.5
N
maker-par_contig_10-snap-gene-0.19
Pythium arrhenomanes
maker-par_contig_10-snap-gene-0.19
N
maker-pir_contig_961-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_961-fgenesh-gene-0.2
N
maker-piw_contig_1376-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_1376-fgenesh-gene-0.0
N
maker-pve_contig_145-fgenesh-gene-0.2
Pythium vexans
maker-pve_contig_145-fgenesh-gene-0.2
N
Phyra80113
Phytophthora ramorum
Phyra80113
N
Physo140472
Phytophthora sojae
Physo140472
N
PITG_09279
Phytophthora infestans
PITG_09279
N
PITG_09280
Phytophthora infestans
PITG_09280
N
PYU1_G001315
Pythium ultimum
PYU1_G001315
N
estExt_fgenesh1_pm.C_70287
Phytophthora capsici
estExt_fgenesh1_pm.C_70287
N