CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG20663
(
Caenorhabditis briggsae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CBG20663
T326877_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG20663
Sox
27
85
PKRAMSAFFFWMQENRERIKKPGMGVADVAKAAGVEWGKLTDKSKWEKKAADDRRDTKL
Links
Other
Sox
family TFs
Other
Caenorhabditis briggsae
TFs
90 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPPYG00000009253
Pongo abelii
ENSPPYG00000009253
N
Sall3
Mus musculus
ENSMUSG00000024565
N
SALL1
Ornithorhynchus anatinus
ENSOANG00000013399
N
ENSOARG00000017583
Ovis aries
ENSOARG00000017583
N
SALL3
Oryctolagus cuniculus
ENSOCUG00000029398
N
ENSONIG00000007305
Oreochromis niloticus
ENSONIG00000007305
N
sall3a
Oryzias latipes
ENSORLG00000020718
N
ENSPANG00000006485
Papio anubis
ENSPANG00000006485
N
ENSPFOG00000019127
Poecilia formosa
ENSPFOG00000019127
N
ENSMPUG00000016646
Mustela putorius furo
ENSMPUG00000016646
N
ENSPSIG00000008556
Pelodiscus sinensis
ENSPSIG00000008556
N
SALL3
Pan troglodytes
ENSPTRG00000010126
N
ENSSHAG00000015872
Sarcophilus harrisii
ENSSHAG00000015872
N
ENSSTOG00000004145
Ictidomys tridecemlineatus
ENSSTOG00000004145
N
sall1a
Takifugu rubripes
ENSTRUG00000008950
N
SALL3
Tursiops truncatus
ENSTTRG00000004958
N
ENSXMAG00000009081
Xiphophorus maculatus
ENSXMAG00000009081
N
Pvit_05136
Pogona vitticeps
Pvit_05136
N
SALL3
Homo sapiens
ENSG00000256463
N
ENSAMEG00000010206
Ailuropoda melanoleuca
ENSAMEG00000010206
N
SALL3
Canis familiaris
ENSCAFG00000000013
N
SALL3
Callithrix jacchus
ENSCJAG00000007332
N
SALL3
Cavia porcellus
ENSCPOG00000008546
N
sall3b
Danio rerio
ENSDARG00000057586
N
sall3a
Danio rerio
ENSDARG00000079613
N
SALL3
Equus caballus
ENSECAG00000015414
N
ENSFALG00000013343
Ficedula albicollis
ENSFALG00000013343
N
SALL3
Anolis carolinensis
ENSACAG00000000478
N
sall3a
Gasterosteus aculeatus
ENSGACG00000005503
N
ENSGALG00000012657
Gallus gallus
ENSGALG00000012657
N
SALL3
Gorilla gorilla
ENSGGOG00000008127
N
ENSGMOG00000006649
Gadus morhua
ENSGMOG00000006649
N
ENSLOCG00000007831
Lepisosteus oculatus
ENSLOCG00000007831
N
SALL3
Meleagris gallopavo
ENSMGAG00000002297
N
SALL3
Macaca mulatta
ENSMMUG00000000286
N
SALL3
Monodelphis domestica
ENSMODG00000012231
N