CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCVIDRAFT_13158
(
Bipolaris victoriae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
COCVIDRAFT_13158
T327157_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EUN30492
Sox
986
1062
VNPFLLFTKDFWYICKQECDEAHRVKSGNADAKAPKQEIRNAVGLKWRTAEQHVKQPYLDQASNAREDATASAVEFK
Links
Other
Sox
family TFs
Other
Bipolaris victoriae
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G009837
Zea mays
GRMZM2G009837
N
GRMZM2G074501
Zea mays
GRMZM2G074501
N
LPERR03G29370
Leersia perrieri
LPERR03G29370
N
OB03G41880
Oryza brachyantha
OB03G41880
N
OBART03G34930
Oryza barthii
OBART03G34930
N
OGLUM03G34660
Oryza glumaepatula
OGLUM03G34660
N
OMERI03G31980
Oryza meridionalis
OMERI03G31980
N
ONIVA03G36430
Oryza nivara
ONIVA03G36430
N
OPUNC03G31970
Oryza punctata
OPUNC03G31970
N
ORGLA03G0319700
Oryza glaberrima
ORGLA03G0319700
N
ORUFI03G36360
Oryza rufipogon
ORUFI03G36360
N
OS03G0759700
Oryza sativa
OS03G0759700
N
Sb01g007440
Sorghum bicolor
Sb01g007440
N
Pavir.Ia00382
Panicum virgatum
Pavir.Ia00382
N