CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_19853
(
Daphnia pulex
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
DAPPUDRAFT_19853
T327314_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.425
0.377
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX60405
Sox
18
86
PQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDALDADSKNVYKKKTEAAKKEYLKALAAYR
Links
Other
Sox
family TFs
Other
Daphnia pulex
TFs
185 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
asl-1
Neurospora crassa
NCU01345
D
0.000
CIMG_03698
Coccidioides immitis
CIMG_03698
I
0.000
CLUG_04484
Candida lusitaniae
CLUG_04484
I
0.000
CPAG_01404
Candida parapsilosis
CPAG_01404
I
0.000
PGUG_04717
Candida guilliermondii
PGUG_04717
I
0.000
RO3G_02213
Rhizopus oryzae
RO3G_02213
I
0.000
RO3G_05311
Rhizopus oryzae
RO3G_05311
I
0.000
RO3G_05746
Rhizopus oryzae
RO3G_05746
I
0.000
RO3G_06379
Rhizopus oryzae
RO3G_06379
I
0.000
RO3G_07073
Rhizopus oryzae
RO3G_07073
I
0.000
RO3G_11082
Rhizopus oryzae
RO3G_11082
I
0.000
RO3G_12109
Rhizopus oryzae
RO3G_12109
I
0.000
SNOG_05677
Stagonospora nodorum
SNOG_05677
I
0.000
SPPG_03108
Spizellomyces punctatus
SPPG_03108
I
0.000
A1O1_03167
Capronia coronata
A1O1_03167
I
0.000
A1O3_01925
Capronia epimyces
A1O3_01925
I
0.000
A1O7_04497
Cladophialophora yegresii
A1O7_04497
I
0.000
A1O9_00939
Exophiala aquamarina
A1O9_00939
I
0.000
ACRE_033300
Acremonium chrysogenum
ACRE_033300
I
0.000
AOL_s00075g120
Arthrobotrys oligospora
AOL_s00075g120
I
0.000
AUEXF2481DRAFT_414412
Aureobasidium subglaciale
AUEXF2481DRAFT_414412
I
0.000
AWRI1499_3213
Brettanomyces bruxellensis
AWRI1499_3213
I
0.000
BAUCODRAFT_49676
Baudoinia compniacensis
BAUCODRAFT_49676
I
0.000
BBA_04813
Beauveria bassiana
BBA_04813
I
0.000
Bcin09g00920
Botrytis cinerea
Bcin09g00920
I
0.000
BDDG_06376
Blastomyces dermatitidis
BDDG_06376
I
0.000
BGHDH14_bgh04237
Blumeria graminis
BGHDH14_bgh04237
I
0.000
ACLA_039220
Aspergillus clavatus
CADACLAG00003763
I
0.000
CADAFLAG00002509
Aspergillus flavus
CADAFLAG00002509
I
0.000
AFUA_3G11330
Aspergillus fumigatus
CADAFUAG00005023
I
0.000
CADANGAG00002223
Aspergillus niger
CADANGAG00002223
I
0.000
ANIA_02911
Aspergillus nidulans
CADANIAG00010178
I
0.000
CADAORAG00001285
Aspergillus oryzae
CADAORAG00001285
I
0.000
NFIA_058100
Neosartorya fischeri
CADNFIAG00004320
I
0.000
NFIA_065970
Neosartorya fischeri
CADNFIAG00005978
I
0.000
CCM_09124
Cordyceps militaris
CCM_09124
I
0.000
CFIO01_09097
Colletotrichum fioriniae
CFIO01_09097
I
0.000
CFIO01_09498
Colletotrichum fioriniae
CFIO01_09498
I
0.000
CGGC5_15082
Colletotrichum gloeosporioides
CGGC5_15082
I
0.000
CH063_00485
Colletotrichum higginsianum
CH063_00485
I
0.000
CH063_08162
Colletotrichum higginsianum
CH063_08162
I
0.000
CHGG_00632
Chaetomium globosum
CHGG_00632
I
0.000
CLUG_04484
Clavispora lusitaniae
CLUG_04484
I
0.000
CMQ_683
Grosmannia clavigera
CMQ_683
I
0.000
Cob_09143
Colletotrichum orbiculare
Cob_09143
I
0.000
Cob_09423
Colletotrichum orbiculare
Cob_09423
I
0.000
COCC4DRAFT_39469
Bipolaris maydis
COCC4DRAFT_39469
I
0.000
COCCADRAFT_110849
Bipolaris zeicola
COCCADRAFT_110849
I
0.000
COCMIDRAFT_100301
Bipolaris oryzae
COCMIDRAFT_100301
I
0.000
COCSADRAFT_216676
Bipolaris sorokiniana
COCSADRAFT_216676
I
0.000
COCVIDRAFT_84814
Bipolaris victoriae
COCVIDRAFT_84814
I
0.000
CORT_0B11490
Candida orthopsilosis
CORT_0B11490
I
0.000
CPUR_07883
Claviceps purpurea
CPUR_07883
I
0.000
CSUB01_02787
Colletotrichum sublineola
CSUB01_02787
I
0.000
CSUB01_03969
Colletotrichum sublineola
CSUB01_03969
I
0.000
CTHT_0051900
Chaetomium thermophilum
CTHT_0051900
I
0.000
CTRG_04352
Candida tropicalis
CTRG_04352
I
0.000
DEHA2D09196g
Debaryomyces hansenii
DEHA2D09196g
I
0.000
DOTSEDRAFT_70140
Dothistroma septosporum
DOTSEDRAFT_70140
I
0.000
atf2/7
Ciona intestinalis
ENSCING00000006645
I
0.000
EPUS_07920
Endocarpon pusillum
EPUS_07920
I
0.000
EURHEDRAFT_81548
Aspergillus ruber
EURHEDRAFT_81548
I
0.000
EV44_g5736
Erysiphe necator
EV44_g5736
I
0.000
F503_00157
Ophiostoma piceae uamh
F503_00157
I
0.000
FFUJ_07310
Fusarium fujikuroi
FFUJ_07310
I
0.000
FGRRES_10142
Fusarium graminearum
FGRRES_10142
I
0.000
FOXG_05265
Fusarium oxysporum
FOXG_05265
I
0.000
FOXG_17639
Fusarium oxysporum
FOXG_17639
I
0.000
FPSE_02636
Fusarium pseudograminearum
FPSE_02636
I
0.000
FVEG_02866
Fusarium verticillioides
FVEG_02866
I
0.000
G210_3015
Candida maltosa
G210_3015
I
0.000
G647_04191
Cladophialophora carrionii
G647_04191
I
0.000
GGTG_00729
Gaeumannomyces graminis
GGTG_00729
I
0.000
GLRG_04311
Colletotrichum graminicola
GLRG_04311
I
0.000
GLRG_05013
Colletotrichum graminicola
GLRG_05013
I
0.000
GMDG_05754
Pseudogymnoascus destructans
GMDG_05754
I
0.000
GNLVRS01_PISO0A10934g
Millerozyma farinosa
GNLVRS01_PISO0A10934g
I
0.000
GNLVRS01_PISO0B11001g
Millerozyma farinosa
GNLVRS01_PISO0B11001g
I
0.000
GNLVRS01_PISO0K05598g
Millerozyma farinosa
GNLVRS01_PISO0K05598g
I
0.000
GNLVRS01_PISO0L05599g
Millerozyma farinosa
GNLVRS01_PISO0L05599g
I
0.000
GSTUM_00002889001
Tuber melanosporum
GSTUM_00002889001
I
0.000
H072_1333
Dactylellina haptotyla
H072_1333
I
0.000
HCBG_06790
Histoplasma capsulatum
HCBG_06790
I
0.000
HMPREF1120_06731
Exophiala dermatitidis
HMPREF1120_06731
I
0.000
HMPREF1541_01690
Cyphellophora europaea
HMPREF1541_01690
I
0.000
HMPREF1624_04302
Sporothrix schenckii
HMPREF1624_04302
I
0.000
HPODL_05042
Ogataea parapolymorpha
HPODL_05042
I
0.000
JL09_g3709
Pichia kudriavzevii
JL09_g3709
I
0.000
LEMA_P001490.1
Leptosphaeria maculans
LEMA_P001490.1
I
0.000
M437DRAFT_75856
Aureobasidium melanogenum
M437DRAFT_75856
I
0.000
M438DRAFT_184342
Aureobasidium pullulans
M438DRAFT_184342
I
0.000
M7I_5710
Glarea lozoyensis
M7I_5710
I
0.000
MAC_08741
Metarhizium acridum
MAC_08741
I
0.000
MAJ_05238
Metarhizium majus
MAJ_05238
I
0.000
MAJ_08066
Metarhizium majus
MAJ_08066
I
0.000
MAM_05099
Metarhizium album
MAM_05099
I
0.000
MAM_08422
Metarhizium album
MAM_08422
I
0.000
MANI_006838
Metarhizium anisopliae
MANI_006838
I
0.000
MAPG_05500
Magnaporthe poae
MAPG_05500
I
0.000
MBM_07911
Marssonina brunnea
MBM_07911
I
0.000
MBR_04276
Metarhizium brunneum
MBR_04276
I
0.000
MBR_09777
Metarhizium brunneum
MBR_09777
I
0.000
MGG_04009
Magnaporthe oryzae
MGG_04009
I
0.000
MGG_08212
Magnaporthe oryzae
MGG_08212
I
0.000
MGU_04987
Metarhizium guizhouense
MGU_04987
I
0.000
MGU_08649
Metarhizium guizhouense
MGU_08649
I
0.000
MPH_06322
Macrophomina phaseolina
MPH_06322
I
0.000
MPH_10839
Macrophomina phaseolina
MPH_10839
I
0.000
MPH_13454
Macrophomina phaseolina
MPH_13454
I
0.000
MYCFIDRAFT_97819
Pseudocercospora fijiensis
MYCFIDRAFT_97819
I
0.000
Mycgr3G98304
Zymoseptoria tritici
Mycgr3G98304
I
0.000
MYCTH_2301171
Myceliophthora thermophila
MYCTH_2301171
I
0.000
NechaG69482
Fusarium solani
NechaG69482
I
0.000
NEUTE1DRAFT_57442
Neurospora tetrasperma
NEUTE1DRAFT_57442
I
0.000
OIDMADRAFT_24756
Oidiodendron maius
OIDMADRAFT_24756
I
0.000
PAAG_01945
Paracoccidioides sp lutzii
PAAG_01945
I
0.000
PABG_02218
Paracoccidioides brasiliensis
PABG_02218
I
0.000
PAS_chr1-1_0165
Komagataella pastoris
PAS_chr1-1_0165
I
0.000
PCH_Pc13g09580
Penicillium rubens
PCH_Pc13g09580
I
0.000
PDE_04903
Penicillium oxalicum
PDE_04903
I
0.000
PDIP_29710
Penicillium digitatum
PDIP_29710
I
0.000
PEX1_106440
Penicillium expansum
PEX1_106440
I
0.000
PFICI_13363
Pestalotiopsis fici
PFICI_13363
I
0.000
PGUG_04717
Meyerozyma guilliermondii
PGUG_04717
I
0.000
PITC_062200
Penicillium italicum
PITC_062200
I
0.000
PMAA_023170
Talaromyces marneffei
PMAA_023170
I
0.000
PODANS_2_1280
Podospora anserina
PODANS_2_1280
I
0.000
PTT_11563
Pyrenophora teres
PTT_11563
I
0.000
PV04_04779
Capronia semiimmersa
PV04_04779
I
0.000
PV05_01676
Exophiala xenobiotica
PV05_01676
I
0.000
PV06_04364
Exophiala oligosperma
PV06_04364
I
0.000
PV07_07561
Cladophialophora immunda
PV07_07561
I
0.000
PV08_10259
Exophiala spinifera
PV08_10259
I
0.000
PV09_06343
Verruconis gallopava
PV09_06343
I
0.000
PV10_00096
Exophiala mesophila
PV10_00096
I
0.000
PV11_05009
Exophiala sideris
PV11_05009
I
0.000
PVAR5_7724
Byssochlamys spectabilis
PVAR5_7724
I
0.000
S40285_01279
Stachybotrys chlorohalonata
S40285_01279
I
0.000
S40288_09027
Stachybotrys chartarum
S40288_09027
I
0.000
SAPIO_CDS10626
Scedosporium apiospermum
SAPIO_CDS10626
I
0.000
SBOR_9967
Sclerotinia borealis
SBOR_9967
I
0.000
SEPMUDRAFT_147966
Sphaerulina musiva
SEPMUDRAFT_147966
I
0.000
SETTUDRAFT_28157
Setosphaeria turcica
SETTUDRAFT_28157
I
0.000
SJAG_01725
Schizosaccharomyces japonicus
SJAG_01725
I
0.000
SMAC_04034
Sordaria macrospora
SMAC_04034
I
0.000
SNOG_05677
Phaeosphaeria nodorum
SNOG_05677
I
0.000
SPAPADRAFT_57838
Spathaspora passalidarum
SPAPADRAFT_57838
I
0.000
SPBR_05727
Sporothrix brasiliensis
SPBR_05727
I
0.000
SS1G_04913
Sclerotinia sclerotiorum
SS1G_04913
I
0.000
THITE_2106467
Thielavia terrestris
THITE_2106467
I
0.000
TRIATDRAFT_39837
Trichoderma atroviride
TRIATDRAFT_39837
I
0.000
TRIREDRAFT_103372
Trichoderma reesei
TRIREDRAFT_103372
I
0.000
TRIVIDRAFT_229017
Trichoderma virens
TRIVIDRAFT_229017
I
0.000
TSTA_031640
Talaromyces stipitatus
TSTA_031640
I
0.000
U727_00433320411
Penicillium solitum
U727_00433320411
I
0.000
UCREL1_7956
Eutypa lata
UCREL1_7956
I
0.000
UCRNP2_7443
Neofusicoccum parvum
UCRNP2_7443
I
0.000
UCRPA7_4570
Togninia minima
UCRPA7_4570
I
0.000
UREG_07457
Uncinocarpus reesii
UREG_07457
I
0.000
UV8b_5734
Ustilaginoidea virens
UV8b_5734
I
0.000
V499_05475
Pseudogymnoascus pannorum
V499_05475
I
0.000
VDAG_08676
Verticillium dahliae
VDAG_08676
I
0.000
VHEMI00377
Torrubiella hemipterigena
VHEMI00377
I
0.000
W97_02473
Coniosporium apollinis
W97_02473
I
0.000
X797_004353
Metarhizium robertsii
X797_004353
I
0.000
X797_010774
Metarhizium robertsii
X797_010774
I
0.000
YALI0_C16863g
Yarrowia lipolytica
YALI0_C16863g
I
0.000
Z517_11227
Fonsecaea pedrosoi
Z517_11227
I
0.000
Z518_09780
Rhinocladiella mackenziei
Z518_09780
I
0.000
Z519_09652
Cladophialophora bantiana
Z519_09652
I
0.000
estExt_fgenesh1_pg.C_130141
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_130141
I
0.000
estExt_fgenesh1_pg.C_150146
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_150146
I
0.000
estExt_fgenesh1_pm.C_chr_10233
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_10233
I
0.000
estExt_fgenesh2_pg.C_10593
Neurospora discreta
estExt_fgenesh2_pg.C_10593
I
0.000
estExt_fgeneshMC_pg.C_20944
Mucor circinelloides
estExt_fgeneshMC_pg.C_20944
I
0.000
estExt_Genewise1Plus.C_sca_5_chr5_3_00629
Nectria haematococca
estExt_Genewise1Plus.C_sca_5_chr5_3_00629
I
0.000
fgenesh1_pg.C_chr_6.1000184
Pichia stipitis
fgenesh1_pg.C_chr_6.1000184
I
0.000
fgeneshMC_pg.1_#_1383
Mucor circinelloides
fgeneshMC_pg.1_#_1383
I
0.000
fgeneshMC_pg.3_#_1354
Mucor circinelloides
fgeneshMC_pg.3_#_1354
I
0.000
fgeneshMC_pg.6_#_568
Mucor circinelloides
fgeneshMC_pg.6_#_568
I
0.000
fgeneshMC_pg.7_#_563
Mucor circinelloides
fgeneshMC_pg.7_#_563
I
0.000
fgeneshMC_pg.8_#_226
Mucor circinelloides
fgeneshMC_pg.8_#_226
I
0.000
fgeneshPB_pg.27__110
Phycomyces blakesleeanus
fgeneshPB_pg.27__110
I
0.000
fgeneshPB_pg.5__109
Phycomyces blakesleeanus
fgeneshPB_pg.5__109
I
0.000
fgeneshPB_pg.6__495
Phycomyces blakesleeanus
fgeneshPB_pg.6__495
I
0.000
AB06842.1
Alternaria brassicicola
AB06842.1
I
0.000
estExt_Genewise1.C_71204
Cryphonectria parasitica
estExt_Genewise1.C_71204
I
0.000
fgenesh1_pg.00866_#_392
Aspergillus carbonarius
fgenesh1_pg.00866_#_392
I
0.000
Pc13g09580
Penicillium chrysogenum
Pc13g09580
I
0.000
PMAA_023170
Penicillium marneffei
PMAA_023170
I
0.000
XP_002489811.1
Pichia pastoris
XP_002489811.1
I
0.000
AMAG_06832
Allomyces macrogynus
AMAG_06832
N
0.000
BN7_1278
Wickerhamomyces ciferrii
BN7_1278
N
0.000
CANTEDRAFT_133526
Candida tenuis
CANTEDRAFT_133526
N
0.000
CaO19.1032
Candida albicans
CaO19.1032
N
0.000
CaO19.8634
Candida albicans
CaO19.8634
N
0.000
CD36_03510
Candida dubliniensis
CD36_03510
N
0.000
LELG_01333
Lodderomyces elongisporus
LELG_01333
N
0.000