CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

sox4a *(Danio rerio)* Sox
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00505 (HMG_box)	IPR000910	ENSDARG00000004588	T327833_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
SOX4 M01026_2.00	Homo sapiens	AACAAWGR	YCWTTGTT	PBM Scharer et al.(2009) Sox4	0.741	1.000
SOX4 M03496_2.00	Homo sapiens	NAACAATTKCAGTGTT	AACACTGMAATTGTTN	SELEX Jolma et al.(2013) SOX4_1	0.741	1.000
SOX4 M05765_2.00	Homo sapiens	NRACAAWGVV	BBCWTTGTYN	SELEX Yin et al.(2017) SOX4_eDBD_HT-SELEX	0.741	1.000
SOX4 M09388_2.00	Homo sapiens	BYCTTTGTYYBB	VVRRACAAAGRV	Misc Kulakovskiy et al.(2013) SOX4_HUMAN.H11MO.0.B	0.741	1.000
SOX4 M11301_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX4_Q3	0.741	1.000
SOX4 M11302_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX4_Q5_02	0.741	1.000
SOX4 M11303_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX4_Q5	0.741	1.000
SOX4 M05766_2.00	Homo sapiens	NRACAAWGVV	BBCWTTGTYN	SELEX Yin et al.(2017) SOX4_eDBD_Methyl-HT-SELEX	0.741	1.000
Sox4 M00213_2.00	Mus musculus	NNVACAAWD	HWTTGTBNN	PBM Badis et al.(2009) Sox4_2941	0.741	0.986
Sox4 M09410_2.00	Mus musculus	BYCTTTGTYYBB	VVRRACAAAGRV	Misc Kulakovskiy et al.(2013) SOX4_MOUSE.H11MO.0.A	0.741	0.986
Sox4 M09641_2.00	Mus musculus	BCWTTGTYCN	NGRACAAWGV	Misc Heinz et al.(2010) proB-Sox4_GSE50066	0.741	0.986
Sox11 M00210_2.00	Mus musculus	WTTGTBNNN	NNNVACAAW	PBM Badis et al.(2009) Sox11_2266	0.741	0.957
Sox11 M03541_2.00	Mus musculus	AACAATTKCAGTGTT	AACACTGMAATTGTT	SELEX Jolma et al.(2013) Sox11_1	0.741	0.957
SOX11 M11326_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX11_Q6	0.741	0.957
Sox12 M00205_2.00	Mus musculus	HWTTGTBNNN	NNNVACAAWD	PBM Badis et al.(2009) Sox12_3957	0.671	0.884
SOX12 M05789_2.00	Homo sapiens	NATTGTTCGGK	MCCGAACAATN	SELEX Yin et al.(2017) SOX12_eDBD_HT-SELEX	0.671	0.884
SOX12 M05790_2.00	Homo sapiens	YATTGTTCBKT	AMVGAACAATR	SELEX Yin et al.(2017) SOX12_eDBD_Methyl-HT-SELEX	0.671	0.884
sem-2 M02488_2.00	Caenorhabditis elegans	NNNHVNNNNN	NNNNNBDNNN	PBM Weirauch et al.(2014) pTH9043	0.603	0.739
Sox14 M03971_2.00	Drosophila melanogaster	BTGTWCGGTR	YACCGWACAV	SELEX Nitta et al.(2015) Sox14_1	0.603	0.710
Sox14 M03972_2.00	Drosophila melanogaster	VACAATDNCATTGTB	VACAATGNHATTGTB	SELEX Nitta et al.(2015) Sox14_2	0.603	0.710
Sox14 M06449_2.00	Drosophila melanogaster	VYYCTTTGTYC	GRACAAAGRRB	B1H Zhu et al.(2011) Sox14_SANGER_10_FBgn0005612	0.603	0.710
Sox5 M00203_2.00	Mus musculus	ATTGTBNN	NNVACAAT	PBM Badis et al.(2009) Sox5_3459	0.589	0.580
Sox13 M00212_2.00	Mus musculus	RAACAATW	WATTGTTY	PBM Badis et al.(2009) Sox13_1718	0.589	0.580
SOX5 M05894_2.00	Homo sapiens	DVACAATRVN	NBYATTGTBH	SMiLE-seq Isakova et al.(2017) SOX5	0.589	0.580
Sox5 M02719_2.00	Mus musculus	NAACAAT	ATTGTTN	SELEX Mathelier et al.(2014) MA0087.1	0.589	0.580
SOX13 M08166_2.00	Homo sapiens	NNACAATGVNN	NNBCATTGTNN	ChIP-seq Mathelier et al.(2014) MA1120.1	0.589	0.580
SOX5 M09390_2.00	Homo sapiens	NAACAATN	NATTGTTN	Misc Kulakovskiy et al.(2013) SOX5_HUMAN.H11MO.0.C	0.589	0.580
Sox5 M09404_2.00	Mus musculus	NAACAATN	NATTGTTN	Misc Kulakovskiy et al.(2013) SOX5_MOUSE.H11MO.0.C	0.589	0.580
SOX5 M11309_2.00	Homo sapiens	NNAACAATNN	NNATTGTTNN	Transfac Matys et al.(2006) V$SOX5_01	0.589	0.580
SOX5 M11310_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX5_Q5	0.589	0.580
Sox6 M00828_2.00	Mus musculus	WTTGTNNNN	NNNNACAAW	PBM Weirauch et al.(2013) pTH3862	0.589	0.565
SOX6 M05892_2.00	Homo sapiens	DRACAATRVN	NBYATTGTYH	SMiLE-seq Isakova et al.(2017) SOX6	0.589	0.565
Sox6 M08169_2.00	Mus musculus	BCWTTGTYYY	RRRACAAWGV	ChIP-seq Mathelier et al.(2014) MA0515.1	0.589	0.565
Sox6 M09640_2.00	Mus musculus	BHWTTGTBNN	NNVACAAWDV	Misc Heinz et al.(2010) Myotubes-Sox6_GSE32627	0.589	0.565
SOX6 M11300_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX6_Q5	0.589	0.565
Sox15 M00202_2.00	Mus musculus	WTTVWNNNN	NNNNWBAAW	PBM Badis et al.(2009) Sox15_3457	0.584	0.652
SOX15 M03508_2.00	Homo sapiens	AACAATAMCATTGTT	AACAATGKTATTGTT	SELEX Jolma et al.(2013) SOX15_1	0.584	0.638
SOX15 M03509_2.00	Homo sapiens	ATCAATAMCATTGAT	ATCAATGKTATTGAT	SELEX Jolma et al.(2013) SOX15_2	0.584	0.638
SOX15 M03510_2.00	Homo sapiens	ATGAATAACATTCAT	ATGAATGTTATTCAT	SELEX Jolma et al.(2013) SOX15_3	0.584	0.638
SOX15 M05893_2.00	Homo sapiens	YYWTTGTNHN	NDNACAAWRR	SMiLE-seq Isakova et al.(2017) SOX15	0.584	0.638
SOX15 M11308_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX15_Q3	0.584	0.638
D M03969_2.00	Drosophila melanogaster	AMVGAACAAT	ATTGTTCBKT	SELEX Nitta et al.(2015) D_1	0.579	0.667
D M03970_2.00	Drosophila melanogaster	NAACAATDNCATTGTTN	NAACAATGNHATTGTTN	SELEX Nitta et al.(2015) D_2	0.579	0.667
Sox21b M03983_2.00	Drosophila melanogaster	NAACAMTWNCAKTGTTB	VAACAMTGNWAKTGTTN	SELEX Nitta et al.(2015) Sox21b_1	0.579	0.667
D M06559_2.00	Drosophila melanogaster	BCYWTTGTTNT	ANAACAAWRGV	B1H Mathelier et al.(2014) MA0445.1	0.579	0.667
D M06448_2.00	Drosophila melanogaster	BCYATTGTYNW	WNRACAATRGV	B1H Zhu et al.(2011) D_NAR_FBgn0000411	0.579	0.667
D M09694_2.00	Drosophila melanogaster	RACAAWRGVH	DBCYWTTGTY	Misc Kulakovskiy et al.(2009) D	0.579	0.667
Sox3 M00827_2.00	Mus musculus	WDTVHNNN	NNNDBAHW	PBM Weirauch et al.(2013) pTH3087	0.578	0.667
Sox3 M03538_2.00	Mus musculus	RAACAATRNYATTGTTK	MAACAATRNYATTGTTY	SELEX Jolma et al.(2013) Sox3_1	0.578	0.667
Sox3 M03539_2.00	Mus musculus	BATCAATGBYATTGATD	HATCAATRVCATTGATV	SELEX Jolma et al.(2013) Sox3_2	0.578	0.667
Sox3 M03540_2.00	Mus musculus	DATGAATKNYATTCATR	YATGAATRNMATTCATH	SELEX Jolma et al.(2013) Sox3_3	0.578	0.667
SOX3 M05769_2.00	Homo sapiens	VYATTKTNVS	SBNAMAATRB	SELEX Yin et al.(2017) SOX3_FL_HT-SELEX	0.578	0.667
Sox3 M08168_2.00	Mus musculus	CCTTTGTYYB	VRRACAAAGG	ChIP-seq Mathelier et al.(2014) MA0514.1	0.578	0.667
SOX3 M09391_2.00	Homo sapiens	BYCWTTGTBYB	VRVACAAWGRV	Misc Kulakovskiy et al.(2013) SOX3_HUMAN.H11MO.0.B	0.578	0.667
Sox3 M09405_2.00	Mus musculus	VRVACAAWGGV	BCCWTTGTBYB	Misc Kulakovskiy et al.(2013) SOX3_MOUSE.H11MO.0.C	0.578	0.667
Sox3 M09639_2.00	Mus musculus	VACAAWRG	CYWTTGTB	Misc Heinz et al.(2010) NPC-Sox3_GSE33059	0.578	0.667
SOX3 M05770_2.00	Homo sapiens	BYATTGTBNN	NNVACAATRV	SELEX Yin et al.(2017) SOX3_FL_Methyl-HT-SELEX	0.578	0.667
Sox7 M00209_2.00	Mus musculus	NNNWBAAT	ATTVWNNN	PBM Badis et al.(2009) Sox7_3460	0.577	0.638
SOX7 M03516_2.00	Homo sapiens	AACAATRDNHAKTGTT	AACAMTDNHYATTGTT	SELEX Jolma et al.(2013) SOX7_1	0.577	0.638
SOX7 M03517_2.00	Homo sapiens	DAACAATKDYAKTGTTN	NAACAMTRHMATTGTTH	SELEX Jolma et al.(2013) SOX7_2	0.577	0.638
SOX7 M03518_2.00	Homo sapiens	NATGAATKDCAKTCATN	NATGAMTGHMATTCATN	SELEX Jolma et al.(2013) SOX7_3	0.577	0.638
SOX7 M05787_2.00	Homo sapiens	ACAATDNHATTGT	ACAATDNHATTGT	SELEX Yin et al.(2017) SOX7_eDBD_HT-SELEX	0.577	0.638
SOX7 M11325_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX7_Q2	0.577	0.638
SOX7 M05788_2.00	Homo sapiens	ACAATDNHATTGT	ACAATDNHATTGT	SELEX Yin et al.(2017) SOX7_eDBD_Methyl-HT-SELEX	0.577	0.638
Sox10 M00826_2.00	Mus musculus	NNNNWBAAT	ATTVWNNNN	PBM Weirauch et al.(2013) pTH1729	0.571	0.667
SOX10 M03491_2.00	Homo sapiens	AACAATTKCAGTGTT	AACACTGMAATTGTT	SELEX Jolma et al.(2013) SOX10_1	0.571	0.667
SOX10 M03492_2.00	Homo sapiens	AACAATRTKCAGTGTT	AACACTGMAYATTGTT	SELEX Jolma et al.(2013) SOX10_2	0.571	0.667
SOX10 M03493_2.00	Homo sapiens	ATCAATTKCAGTGAT	ATCACTGMAATTGAT	SELEX Jolma et al.(2013) SOX10_3	0.571	0.667
SOX10 M03494_2.00	Homo sapiens	ATGAATTKCAGTCAT	ATGACTGMAATTCAT	SELEX Jolma et al.(2013) SOX10_4	0.571	0.667
SOX10 M03495_2.00	Homo sapiens	TGAATGTKCAGTCA	TGACTGMACATTCA	SELEX Jolma et al.(2013) SOX10_5	0.571	0.667
Sox10 M03535_2.00	Mus musculus	AACAATTKCAGTGTT	AACACTGMAATTGTT	SELEX Jolma et al.(2013) Sox10_1	0.571	0.667
Sox10 M03536_2.00	Mus musculus	ATCAATTKCAGTGAT	ATCACTGMAATTGAT	SELEX Jolma et al.(2013) Sox10_2	0.571	0.667
Sox10 M03537_2.00	Mus musculus	ATGAATTDCAGTCAT	ATGACTGHAATTCAT	SELEX Jolma et al.(2013) Sox10_3	0.571	0.667
SOX10 M05759_2.00	Homo sapiens	AACAATRNNNYATTGTT	AACAATRNNNYATTGTT	SELEX Yin et al.(2017) SOX10_eDBD_HT-SELEX	0.571	0.667
SOX10 M05761_2.00	Homo sapiens	NACAATRVNNBYATTGTN	NACAATRVNNBYATTGTN	SELEX Yin et al.(2017) SOX10_FL_HT-SELEX	0.571	0.667
SOX10 M05891_2.00	Homo sapiens	BBCWWTGTTH	DAACAWWGVV	SMiLE-seq Isakova et al.(2017) SOX10	0.571	0.667
SOX10 M08165_2.00	Homo sapiens	NNVACAAAGVN	NBCTTTGTBNN	ChIP-seq Mathelier et al.(2014) MA0442.2	0.571	0.667
SOX10 M09387_2.00	Homo sapiens	VAADRVVNBCWTTGTN	NACAAWGVNBBYHTTB	Misc Kulakovskiy et al.(2013) SOX10_HUMAN.H11MO.0.B	0.571	0.667
Sox10 M09403_2.00	Mus musculus	VAADRVVNBCWTTGTN	NACAAWGVNBBYHTTB	Misc Kulakovskiy et al.(2013) SOX10_MOUSE.H11MO.0.B	0.571	0.667
SOX10 M11296_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX10_Q3	0.571	0.667
SOX10 M11297_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX10_Q6_01	0.571	0.667
SOX10 M11298_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX10_Q6	0.571	0.667
SOX10 M05760_2.00	Homo sapiens	AACAATRSNSYATTGTT	AACAATRSNSYATTGTT	SELEX Yin et al.(2017) SOX10_eDBD_Methyl-HT-SELEX	0.571	0.667
SOX10 M05762_2.00	Homo sapiens	NACAATRVNNBYATTGTN	NACAATRVNNBYATTGTN	SELEX Yin et al.(2017) SOX10_FL_Methyl-HT-SELEX	0.571	0.667
Sox8 M00197_2.00	Mus musculus	NNNWBAAT	ATTVWNNN	PBM Badis et al.(2009) Sox8_1733	0.571	0.638
SOX8 M03483_2.00	Homo sapiens	AACAATRTGCAGTGTT	AACACTGCAYATTGTT	SELEX Jolma et al.(2013) SOX8_1	0.571	0.638
SOX8 M03484_2.00	Homo sapiens	ATGAATTKCAGTC	GACTGMAATTCAT	SELEX Jolma et al.(2013) SOX8_2	0.571	0.638
SOX8 M03485_2.00	Homo sapiens	RAACAATTKCAGTGTTN	NAACACTGMAATTGTTY	SELEX Jolma et al.(2013) SOX8_3	0.571	0.638
SOX8 M03486_2.00	Homo sapiens	HATCAATTKCAGTGATN	NATCACTGMAATTGATD	SELEX Jolma et al.(2013) SOX8_4	0.571	0.638
SOX8 M03487_2.00	Homo sapiens	TGAATRTKCAGTCA	TGACTGMAYATTCA	SELEX Jolma et al.(2013) SOX8_5	0.571	0.638
SOX8 M03488_2.00	Homo sapiens	AACAATTDCAGTGTT	AACACTGHAATTGTT	SELEX Jolma et al.(2013) SOX8_6	0.571	0.638
SOX8 M03489_2.00	Homo sapiens	ATGAATTKCAGTC	GACTGMAATTCAT	SELEX Jolma et al.(2013) SOX8_7	0.571	0.638
SOX8 M03490_2.00	Homo sapiens	MATCAATTGCAGTGATK	MATCACTGCAATTGATK	SELEX Jolma et al.(2013) SOX8_8	0.571	0.638
SOX9 M03501_2.00	Homo sapiens	DDACAATRV	BYATTGTHH	SELEX Jolma et al.(2013) SOX9_1	0.571	0.638
SOX9 M03502_2.00	Homo sapiens	AACAATRTGCAGTGTT	AACACTGCAYATTGTT	SELEX Jolma et al.(2013) SOX9_2	0.571	0.638
SOX9 M03503_2.00	Homo sapiens	ATCAATRTKCAGTGAT	ATCACTGMAYATTGAT	SELEX Jolma et al.(2013) SOX9_3	0.571	0.638
SOX9 M03504_2.00	Homo sapiens	ATGAATRTKCAGTCAT	ATGACTGMAYATTCAT	SELEX Jolma et al.(2013) SOX9_4	0.571	0.638
SOX9 M03505_2.00	Homo sapiens	RAACAATTKCAGTGTTH	DAACACTGMAATTGTTY	SELEX Jolma et al.(2013) SOX9_5	0.571	0.638
SOX9 M03506_2.00	Homo sapiens	NATCAATKKYAGTGATN	NATCACTRMMATTGATN	SELEX Jolma et al.(2013) SOX9_6	0.571	0.638
SOX9 M03507_2.00	Homo sapiens	NATGAATTKCAGTCATN	NATGACTGMAATTCATN	SELEX Jolma et al.(2013) SOX9_7	0.571	0.638
SOX8 M05749_2.00	Homo sapiens	NDAACAATRV	BYATTGTTHN	SELEX Yin et al.(2017) SOX8_eDBD_HT-SELEX	0.571	0.638
SOX8 M05751_2.00	Homo sapiens	ACAATRVNNBYATTGT	ACAATRVNNBYATTGT	SELEX Yin et al.(2017) SOX8_FL_HT-SELEX	0.571	0.638
SOX9 M05767_2.00	Homo sapiens	HDAACAATRV	BYATTGTTHD	SELEX Yin et al.(2017) SOX9_eDBD_HT-SELEX	0.571	0.638
SOX9 M02716_2.00	Homo sapiens	DAACAATRG	CYATTGTTH	SELEX Mathelier et al.(2014) MA0077.1	0.571	0.638
SOX9 M09389_2.00	Homo sapiens	RMACAAWGVNNBYHTT	AADRVNNBCWTTGTKY	Misc Kulakovskiy et al.(2013) SOX9_HUMAN.H11MO.0.B	0.571	0.638
Sox9 M09399_2.00	Mus musculus	RMACAAWGVNNBYHTT	AADRVNNBCWTTGTKY	Misc Kulakovskiy et al.(2013) SOX9_MOUSE.H11MO.0.A	0.571	0.638
SOX9 M11304_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX9_09	0.571	0.638
SOX9 M11305_2.00	Homo sapiens	NNNDAACAATRRNN	NNYYATTGTTHNNN	Transfac Matys et al.(2006) V$SOX9_B1	0.571	0.638
SOX9 M11306_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX9_Q4	0.571	0.638
SOX9 M11307_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX9_Q5	0.571	0.638
SOX8 M05750_2.00	Homo sapiens	BYATTGTTNN	NNAACAATRV	SELEX Yin et al.(2017) SOX8_eDBD_Methyl-HT-SELEX	0.571	0.638
SOX8 M05752_2.00	Homo sapiens	ACAATRVNNBYATTGT	ACAATRVNNBYATTGT	SELEX Yin et al.(2017) SOX8_FL_Methyl-HT-SELEX	0.571	0.638
SOX9 M05768_2.00	Homo sapiens	NNNACAATRS	SYATTGTNNN	SELEX Yin et al.(2017) SOX9_eDBD_Methyl-HT-SELEX	0.571	0.638
Sox21a M03978_2.00	Drosophila melanogaster	NMACAMTAVCATTGTKN	NMACAATGBTAKTGTKN	SELEX Nitta et al.(2015) Sox21a_1	0.568	0.652
Sox21a M03979_2.00	Drosophila melanogaster	NNACAMTANCATTGTYH	DRACAATGNTAKTGTNN	SELEX Nitta et al.(2015) Sox21a_2	0.568	0.652
Sox14 M00829_2.00	Mus musculus	NAACAATD	HATTGTTN	PBM Weirauch et al.(2013) pTH2677	0.568	0.638
Sox14 M00206_2.00	Mus musculus	NNNABAAW	WTTVTNNN	PBM Badis et al.(2009) Sox14_2677	0.568	0.638
SOX14 M03513_2.00	Homo sapiens	ACAMTAMCATTG	CAATGKTAKTGT	SELEX Jolma et al.(2013) SOX14_1	0.568	0.638
SOX14 M03514_2.00	Homo sapiens	NTGAATANCATTCAN	NTGAATGNTATTCAN	SELEX Jolma et al.(2013) SOX14_2	0.568	0.638
SOX14 M03515_2.00	Homo sapiens	TCAATWVCATTGA	TCAATGBWATTGA	SELEX Jolma et al.(2013) SOX14_3	0.568	0.638
SOX14 M05783_2.00	Homo sapiens	NYATTGWNNN	NNNWCAATRN	SELEX Yin et al.(2017) SOX14_eDBD_HT-SELEX	0.568	0.638
SOX14 M05785_2.00	Homo sapiens	NCGAACAATK	MATTGTTCGN	SELEX Yin et al.(2017) SOX14_FL_HT-SELEX	0.568	0.638
SOX14 M05784_2.00	Homo sapiens	NYATTGTNNN	NNNACAATRN	SELEX Yin et al.(2017) SOX14_eDBD_Methyl-HT-SELEX	0.568	0.638
SOX14 M05786_2.00	Homo sapiens	NATTGTTYGB	VCRAACAATN	SELEX Yin et al.(2017) SOX14_FL_Methyl-HT-SELEX	0.568	0.638
Sox21 M00208_2.00	Mus musculus	WTTVWNNNN	NNNNWBAAW	PBM Badis et al.(2009) Sox21_3417	0.568	0.652
SOX21 M03497_2.00	Homo sapiens	AACAATKKYAKTGTT	AACAMTRMMATTGTT	SELEX Jolma et al.(2013) SOX21_1	0.568	0.652
SOX21 M03498_2.00	Homo sapiens	AACAATRKDYAKTGTT	AACAMTRHMYATTGTT	SELEX Jolma et al.(2013) SOX21_2	0.568	0.652
SOX21 M03499_2.00	Homo sapiens	TCAATGDYAKTGA	TCAMTRHCATTGA	SELEX Jolma et al.(2013) SOX21_3	0.568	0.652
SOX21 M03500_2.00	Homo sapiens	TGAATGKYAKTCA	TGAMTRMCATTCA	SELEX Jolma et al.(2013) SOX21_4	0.568	0.652
SOX2 M03519_2.00	Homo sapiens	DAACAATGKYAKTGTTN	NAACAMTRMCATTGTTH	SELEX Jolma et al.(2013) SOX2_1	0.568	0.638
SOX2 M03520_2.00	Homo sapiens	VTGAATGDYATTCAN	NTGAATRHCATTCAB	SELEX Jolma et al.(2013) SOX2_2	0.568	0.638
SOX2 M03521_2.00	Homo sapiens	NATCAATGNYATTGAWD	HWTCAATRNCATTGATN	SELEX Jolma et al.(2013) SOX2_3	0.568	0.638
SOX2 M03522_2.00	Homo sapiens	NAACAATANCATTGTTH	DAACAATGNTATTGTTN	SELEX Jolma et al.(2013) SOX2_4	0.568	0.638
SOX2 M03523_2.00	Homo sapiens	HATCAATANCATTGATH	DATCAATGNTATTGATD	SELEX Jolma et al.(2013) SOX2_5	0.568	0.638
SOX2 M03524_2.00	Homo sapiens	DTGAATWNCATTCAH	DTGAATGNWATTCAH	SELEX Jolma et al.(2013) SOX2_6	0.568	0.638
SoxN M03976_2.00	Drosophila melanogaster	VYGHACARTNN	NNAYTGTDCRB	SELEX Nitta et al.(2015) SoxN_1	0.568	0.638
SoxN M03977_2.00	Drosophila melanogaster	NCAATNVCATTGN	NCAATGBNATTGN	SELEX Nitta et al.(2015) SoxN_2	0.568	0.638
SOX2 M05897_2.00	Homo sapiens	NACAAWRRNN	NNYYWTTGTN	SMiLE-seq Isakova et al.(2017) SOX2	0.568	0.638
Sox2 M08170_2.00	Mus musculus	CCWTTGTB	VACAAWGG	ChIP-seq Mathelier et al.(2014) MA0143.3	0.568	0.638
Sox2 M08041_2.00	Mus musculus	WHWRMADNACAAWRR	YYWTTGTNHTKYWDW	ChIP-seq Chen et al.(2011) SRP000217_Sox2	0.568	0.638
Sox2 M08042_2.00	Mus musculus	TTWRCATNWSAAWRV	BYWTTSWNATGYWAA	ChIP-seq Chen et al.(2011) SRP000712_Sox2	0.568	0.638
SOX2 M09397_2.00	Homo sapiens	BBYYWTTGTBYBB	VVRVACAAWRRVV	Misc Kulakovskiy et al.(2013) SOX2_HUMAN.H11MO.0.A	0.568	0.638
Sox2 M09409_2.00	Mus musculus	THWRCATNACAAWRRV	BYYWTTGTNATGYWDA	Misc Kulakovskiy et al.(2013) SOX2_MOUSE.H11MO.0.A	0.568	0.638
SOX2 M11327_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q3_01	0.568	0.638
SOX2 M11328_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q3	0.568	0.638
SOX2 M11329_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q4	0.568	0.638
SOX2 M11330_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q6	0.568	0.638
Sox1 M00214_2.00	Mus musculus	NNNNNWBAAW	WTTVWNNNNN	PBM Badis et al.(2009) Sox1_2631	0.568	0.609
Sox1 M03542_2.00	Mus musculus	VACAATWNCATTGTT	AACAATGNWATTGTB	SELEX Jolma et al.(2013) Sox1_1	0.568	0.609
Sox1 M03543_2.00	Mus musculus	NTGAATWNCATTCAN	NTGAATGNWATTCAN	SELEX Jolma et al.(2013) Sox1_2	0.568	0.609
Sox1 M03544_2.00	Mus musculus	TCAATWNCATTGA	TCAATGNWATTGA	SELEX Jolma et al.(2013) Sox1_3	0.568	0.609
Sox1 M03545_2.00	Mus musculus	TGAATDDNHATTCA	TGAATDNHHATTCA	SELEX Jolma et al.(2013) Sox1_4	0.568	0.609
Sox17 M00199_2.00	Mus musculus	NNNNWSAAT	ATTSWNNNN	PBM Badis et al.(2009) Sox17_2837	0.568	0.609
Sox17 M03533_2.00	Mus musculus	AACAATWDCATTGTT	AACAATGHWATTGTT	SELEX Jolma et al.(2013) Sox17_1	0.568	0.609
Sox17 M03534_2.00	Mus musculus	ATGAATWNCATTCAT	ATGAATGNWATTCAT	SELEX Jolma et al.(2013) Sox17_2	0.568	0.609
SOX17 M05896_2.00	Homo sapiens	DRACAATRVN	NBYATTGTYH	SMiLE-seq Isakova et al.(2017) SOX17	0.568	0.609
Sox17 M02718_2.00	Mus musculus	SACAATRNN	NNYATTGTS	SELEX Mathelier et al.(2014) MA0078.1	0.568	0.609
Sox17 M08040_2.00	Mus musculus	RVACAAWRRVN	NBYYWTTGTBY	ChIP-seq Chen et al.(2011) GSE19026_Sox17_XENcells	0.568	0.609
SOX17 M09396_2.00	Homo sapiens	BCCATTKTNBN	NVNAMAATGGV	Misc Kulakovskiy et al.(2013) SOX17_HUMAN.H11MO.0.C	0.568	0.609
SOX17 M11323_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX17_01	0.568	0.609
SOX17 M11324_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX17_Q2	0.568	0.609
Sox18 M00204_2.00	Mus musculus	NNNWBAAT	ATTVWNNN	PBM Badis et al.(2009) Sox18_3506	0.568	0.580
SOX18 M03529_2.00	Homo sapiens	AACAATDNCATTGTT	AACAATGNHATTGTT	SELEX Jolma et al.(2013) SOX18_1	0.568	0.580
SOX18 M03530_2.00	Homo sapiens	ATCAATWDCATTGAT	ATCAATGHWATTGAT	SELEX Jolma et al.(2013) SOX18_2	0.568	0.580
SOX18 M03531_2.00	Homo sapiens	ATGAATWYCATTCAT	ATGAATGRWATTCAT	SELEX Jolma et al.(2013) SOX18_3	0.568	0.580
SOX18 M05791_2.00	Homo sapiens	VACRAYGV	BCRTYGTB	SELEX Yin et al.(2017) SOX18_eDBD_HT-SELEX	0.568	0.580
SOX18 M11334_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX18_Q5_01	0.568	0.580
SOX18 M11335_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX18_Q5	0.568	0.580
SOX18 M05792_2.00	Homo sapiens	BYATTGTN	NACAATRV	SELEX Yin et al.(2017) SOX18_eDBD_Methyl-HT-SELEX	0.568	0.580
Sox15 M03973_2.00	Drosophila melanogaster	WYTGTTCGGTD	HACCGAACARW	SELEX Nitta et al.(2015) Sox15_1	0.549	0.565
Sox15 M03974_2.00	Drosophila melanogaster	VACAATDNCATTGTN	NACAATGNHATTGTB	SELEX Nitta et al.(2015) Sox15_2	0.549	0.565
Sox15 M06450_2.00	Drosophila melanogaster	RWACAATR	YATTGTWY	B1H Zhu et al.(2011) Sox15_SANGER_5_FBgn0005613	0.549	0.565
egl-13 M00710_2.00	Caenorhabditis elegans	NNAACAATWN	NWATTGTTNN	PBM Narasimhan et al.(2015) pTH9125	0.546	0.580
Sox102F M03981_2.00	Drosophila melanogaster	ATTGTTCGGTGKN	NMCACCGAACAAT	SELEX Nitta et al.(2015) Sox102F_1	0.546	0.580
Sox102F M03982_2.00	Drosophila melanogaster	NAACAATDDCATTGTTN	NAACAATGHHATTGTTN	SELEX Nitta et al.(2015) Sox102F_2	0.546	0.580
SRY M03525_2.00	Homo sapiens	AACAATANCATTGTT	AACAATGNTATTGTT	SELEX Jolma et al.(2013) SRY_1	0.543	0.522
SRY M03526_2.00	Homo sapiens	AACAATHHNCATTGTT	AACAATGNDDATTGTT	SELEX Jolma et al.(2013) SRY_2	0.543	0.522
SRY M03527_2.00	Homo sapiens	TCAATAMCATTGA	TCAATGKTATTGA	SELEX Jolma et al.(2013) SRY_3	0.543	0.522
SRY M03528_2.00	Homo sapiens	TGAATANCATTCA	TGAATGNTATTCA	SELEX Jolma et al.(2013) SRY_4	0.543	0.522
SRY M05898_2.00	Homo sapiens	NACAATNV	BNATTGTN	SMiLE-seq Isakova et al.(2017) SRY	0.543	0.522
SRY M02717_2.00	Homo sapiens	NDWAACAAW	WTTGTWWHN	SELEX Mathelier et al.(2014) MA0084.1	0.543	0.522
SRY M09398_2.00	Homo sapiens	BWTTGTTWH	DWAACAAWV	Misc Kulakovskiy et al.(2013) SRY_HUMAN.H11MO.0.B	0.543	0.522
SRY M11331_2.00	Homo sapiens	AAWSWMM	KKWSWTT	Transfac Matys et al.(2006) V$SRY_01	0.543	0.522
SRY M11332_2.00	Homo sapiens	HBHWTTGTTWDN	NHWAACAAWDVD	Transfac Matys et al.(2006) V$SRY_02	0.543	0.522
SRY M11333_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SRY_Q6	0.543	0.522
Sry M00211_2.00	Mus musculus	ATTRTNNNNN	NNNNNAYAAT	PBM Badis et al.(2009) Sry_2833	0.542	0.580
Sry M09408_2.00	Mus musculus	BWTTGTTWH	DWAACAAWV	Misc Kulakovskiy et al.(2013) SRY_MOUSE.H11MO.0.B	0.542	0.580
Sox30 M00201_2.00	Mus musculus	ATTRTBNNNN	NNNNVAYAAT	PBM Badis et al.(2009) Sox30_2781	0.527	0.420
SOX30 M05753_2.00	Homo sapiens	NRACAATN	NATTGTYN	SELEX Yin et al.(2017) SOX30_eDBD_HT-SELEX	0.527	0.420
SOX30 M05754_2.00	Homo sapiens	BATTGTYN	NRACAATV	SELEX Yin et al.(2017) SOX30_eDBD_Methyl-HT-SELEX	0.527	0.420
ROX1 M00070_2.00	Saccharomyces cerevisiae	NRAACAATWNN	NNWATTGTTYN	PBM Badis et al.(2008) ROX1_2099	0.491	0.391
ROX1 M07498_2.00	Saccharomyces cerevisiae	YYHATTGTTYTS	SARAACAATDRR	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0371.1	0.491	0.391
ROX1 M08607_2.00	Saccharomyces cerevisiae	BYATTGTN	NACAATRV	Misc DeBoer et al.(2011) YPR065W_1396	0.491	0.391
ROX1 M11346_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$ROX1_Q6_01	0.491	0.391
ROX1 M11347_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$ROX1_Q6	0.491	0.391
For this family, TFs with SR scores > 0.415* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSDARP00000002932	Sox	64	132	IKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADYPDYK

Links
Other Sox family TFs
Other *Danio rerio* TFs

2092 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
SEP3	Arabidopsis thaliana	AT1G24260	D
AGL3	Arabidopsis thaliana	AT2G03710	D
AGL6	Arabidopsis thaliana	AT2G45650	D
SEP2	Arabidopsis thaliana	AT3G02310	D
SEP1	Arabidopsis thaliana	AT5G15800	D
MAD17_ORYSJ	Oryza sativa	MAD17_ORYSJ	D
MADS6	Oryza sativa	OS02G0682200	D
MADS1	Oryza sativa	OS03G0215400	D
MADS5	Oryza sativa	OS06G0162800	D
MADS7	Oryza sativa	OS08G0531700	D
MADS8	Oryza sativa	OS09G0507200	D
Q9LEH9_HORVU	Hordeum vulgare	Q9LEH9_HORVU	D
Solyc05g012020.2	Solanum lycopersicum	Solyc05g012020.2	D
AGL9_PETHY	Petunia x hybrida	AGL9_PETHY	D
Q6UGQ8_PETHY	Petunia x hybrida	Q6UGQ8_PETHY	D
Q9ATE6_PETHY	Petunia x hybrida	Q9ATE6_PETHY	D
Q9ATF1_PETHY	Petunia x hybrida	Q9ATF1_PETHY	D
Q9ATF3_PETHY	Petunia x hybrida	Q9ATF3_PETHY	D
Q9LM09_TOBAC	Nicotiana tabacum	Q9LM09_TOBAC	D
O82084_MALDO	Malus domestica	O82084_MALDO	D
O82697_MALDO	Malus domestica	O82697_MALDO	D
Q9SBA6_MALDO	Malus domestica	Q9SBA6_MALDO	D
Q9ST54_MALDO	Malus domestica	Q9ST54_MALDO	D
AGL9_SOLLC	Solanum lycopersicum	AGL9_SOLLC	I
SEP4	Arabidopsis lyrata	Al_scaffold_0005_309	I
AMTR_s00001p00267050	Amborella trichopoda	AMTR_s00001p00267050	I
AMTR_s00013p00103080	Amborella trichopoda	AMTR_s00013p00103080	I
AMTR_s00047p00190220	Amborella trichopoda	AMTR_s00047p00190220	I
BGIOSGA008820	Oryza indica	BGIOSGA008820	I
BGIOSGA009797	Oryza indica	BGIOSGA009797	I
MADS1	Oryza indica	BGIOSGA011213	I
BGIOSGA016980	Oryza indica	BGIOSGA016980	I
MADS5	Oryza indica	BGIOSGA021849	I
MADS7	Oryza indica	BGIOSGA029052	I
BGIOSGA031056	Oryza indica	BGIOSGA031056	I
Bo1g157450	Brassica oleracea	Bo1g157450	I
Bo2g137070	Brassica oleracea	Bo2g137070	I
Bo3g010720	Brassica oleracea	Bo3g010720	I
Bo3g141410	Brassica oleracea	Bo3g141410	I
Bo4g024840	Brassica oleracea	Bo4g024840	I
Bo5g051910	Brassica oleracea	Bo5g051910	I
Bo5g152700	Brassica oleracea	Bo5g152700	I
Bo7g050020	Brassica oleracea	Bo7g050020	I
Bo7g081460	Brassica oleracea	Bo7g081460	I
Bo9g074400	Brassica oleracea	Bo9g074400	I
Bo9g163790	Brassica oleracea	Bo9g163790	I
Bra004927	Brassica rapa	Bra004927	I
Bra006322	Brassica rapa	Bra006322	I
Bra008674	Brassica rapa	Bra008674	I
Bra010955	Brassica rapa	Bra010955	I
Bra021470	Brassica rapa	Bra021470	I
Bra025126	Brassica rapa	Bra025126	I
Bra026543	Brassica rapa	Bra026543	I
Bra030032	Brassica rapa	Bra030032	I
Bra032814	Brassica rapa	Bra032814	I
Bra039170	Brassica rapa	Bra039170	I
BRADI1G08326	Brachypodium distachyon	BRADI1G08326	I
BRADI1G48520	Brachypodium distachyon	BRADI1G48520	I
BRADI1G69890	Brachypodium distachyon	BRADI1G69890	I
BRADI3G41260	Brachypodium distachyon	BRADI3G41260	I
BRADI3G51800	Brachypodium distachyon	BRADI3G51800	I
BRADI4G34680	Brachypodium distachyon	BRADI4G34680	I
F775_18054	Aegilops tauschii	F775_18054	I
F775_27415	Aegilops tauschii	F775_27415	I
F775_29383	Aegilops tauschii	F775_29383	I
F775_31247	Aegilops tauschii	F775_31247	I
F775_32954	Aegilops tauschii	F775_32954	I
F775_43880	Aegilops tauschii	F775_43880	I
SEP3	Arabidopsis lyrata	fgenesh2_kg.1__2877__AT1G24260.1	I
AGL6	Arabidopsis lyrata	fgenesh2_kg.4__2761__AT2G45650.1	I
GLYMA01G08130	Glycine max	GLYMA01G08130	I
GLYMA02G13401	Glycine max	GLYMA02G13401	I
GLYMA03G02210	Glycine max	GLYMA03G02210	I
GLYMA05G03660	Glycine max	GLYMA05G03660	I
GLYMA05G07286	Glycine max	GLYMA05G07286	I
GLYMA05G28140	Glycine max	GLYMA05G28140	I
GLYMA07G08890	Glycine max	GLYMA07G08890	I
GLYMA08G11120	Glycine max	GLYMA08G11120	I
GLYMA08G27670	Glycine max	GLYMA08G27670	I
GLYMA11G36890	Glycine max	GLYMA11G36890	I
GLYMA13G06730	Glycine max	GLYMA13G06730	I
GLYMA17G08861	Glycine max	GLYMA17G08861	I
GLYMA18G00801	Glycine max	GLYMA18G00801	I
GLYMA18G50900	Glycine max	GLYMA18G50900	I
GLYMA19G04320	Glycine max	GLYMA19G04320	I
GRMZM2G003514	Zea mays	GRMZM2G003514	I
GRMZM2G071620	Zea mays	GRMZM2G071620	I
GRMZM2G087095	Zea mays	GRMZM2G087095	I
GRMZM2G097059	Zea mays	GRMZM2G097059	I
GRMZM2G099522	Zea mays	GRMZM2G099522	I
GRMZM2G102161	Zea mays	GRMZM2G102161	I
GRMZM2G129034	Zea mays	GRMZM2G129034	I
GRMZM2G159397	Zea mays	GRMZM2G159397	I
GRMZM2G160565	Zea mays	GRMZM2G160565	I
GSMUA_Achr11G19540_001	Musa acuminata	GSMUA_Achr11G19540_001	I
GSMUA_Achr1G00750_001	Musa acuminata	GSMUA_Achr1G00750_001	I
GSMUA_Achr1G24060_001	Musa acuminata	GSMUA_Achr1G24060_001	I
GSMUA_Achr2G04350_001	Musa acuminata	GSMUA_Achr2G04350_001	I
GSMUA_Achr2G06250_001	Musa acuminata	GSMUA_Achr2G06250_001	I
GSMUA_Achr2G10250_001	Musa acuminata	GSMUA_Achr2G10250_001	I
GSMUA_Achr3G15930_001	Musa acuminata	GSMUA_Achr3G15930_001	I
GSMUA_Achr4G30120_001	Musa acuminata	GSMUA_Achr4G30120_001	I
GSMUA_Achr7G26700_001	Musa acuminata	GSMUA_Achr7G26700_001	I
GSMUA_Achr8G28100_001	Musa acuminata	GSMUA_Achr8G28100_001	I
GSMUA_Achr9G01370_001	Musa acuminata	GSMUA_Achr9G01370_001	I
GSMUA_Achr9G29320_001	Musa acuminata	GSMUA_Achr9G29320_001	I
LPERR01G34270	Leersia perrieri	LPERR01G34270	I
LPERR02G22830	Leersia perrieri	LPERR02G22830	I
LPERR03G07630	Leersia perrieri	LPERR03G07630	I
LPERR03G28970	Leersia perrieri	LPERR03G28970	I
LPERR04G18560	Leersia perrieri	LPERR04G18560	I
LPERR06G03790	Leersia perrieri	LPERR06G03790	I
LPERR08G18320	Leersia perrieri	LPERR08G18320	I
LPERR09G11910	Leersia perrieri	LPERR09G11910	I
MLOC_52944	Hordeum vulgare	MLOC_52944	I
MLOC_56472	Hordeum vulgare	MLOC_56472	I
MLOC_64157	Hordeum vulgare	MLOC_64157	I
MTR_3g084980	Medicago truncatula	MTR_3g084980	I
MTR_4g109810	Medicago truncatula	MTR_4g109810	I
MTR_5g046870	Medicago truncatula	MTR_5g046870	I
MTR_6g015975	Medicago truncatula	MTR_6g015975	I
MTR_7g016600	Medicago truncatula	MTR_7g016600	I
MTR_7g075850	Medicago truncatula	MTR_7g075850	I
MTR_8g033270	Medicago truncatula	MTR_8g033270	I
MTR_8g097090	Medicago truncatula	MTR_8g097090	I
OB01G48510	Oryza brachyantha	OB01G48510	I
OB02G35340	Oryza brachyantha	OB02G35340	I
OB03G18710	Oryza brachyantha	OB03G18710	I
OB03G41500	Oryza brachyantha	OB03G41500	I
OB04G29660	Oryza brachyantha	OB04G29660	I
OB06G13870	Oryza brachyantha	OB06G13870	I
OB08G28330	Oryza brachyantha	OB08G28330	I
OB09G22330	Oryza brachyantha	OB09G22330	I
OBART02G28030	Oryza barthii	OBART02G28030	I
OBART03G08330	Oryza barthii	OBART03G08330	I
OBART03G34530	Oryza barthii	OBART03G34530	I
OBART04G22790	Oryza barthii	OBART04G22790	I
OBART06G04180	Oryza barthii	OBART06G04180	I
OBART08G21550	Oryza barthii	OBART08G21550	I
OBART09G15760	Oryza barthii	OBART09G15760	I
OGLUM02G28590	Oryza glumaepatula	OGLUM02G28590	I
OGLUM03G08470	Oryza glumaepatula	OGLUM03G08470	I
OGLUM03G34160	Oryza glumaepatula	OGLUM03G34160	I
OGLUM04G22680	Oryza glumaepatula	OGLUM04G22680	I
OGLUM06G04290	Oryza glumaepatula	OGLUM06G04290	I
OGLUM08G22820	Oryza glumaepatula	OGLUM08G22820	I
OGLUM09G16330	Oryza glumaepatula	OGLUM09G16330	I
OLONG_003266	Oryza longistaminata	OLONG_003266	I
OLONG_005647	Oryza longistaminata	OLONG_005647	I
OLONG_005831	Oryza longistaminata	OLONG_005831	I
OLONG_009999	Oryza longistaminata	OLONG_009999	I
OLONG_010502	Oryza longistaminata	OLONG_010502	I
OLONG_014832	Oryza longistaminata	OLONG_014832	I
OMERI02G27210	Oryza meridionalis	OMERI02G27210	I
OMERI03G08080	Oryza meridionalis	OMERI03G08080	I
OMERI03G31620	Oryza meridionalis	OMERI03G31620	I
OMERI04G19060	Oryza meridionalis	OMERI04G19060	I
OMERI06G04850	Oryza meridionalis	OMERI06G04850	I
OMERI06G13620	Oryza meridionalis	OMERI06G13620	I
OMERI07G04970	Oryza meridionalis	OMERI07G04970	I
ONIVA02G31130	Oryza nivara	ONIVA02G31130	I
ONIVA03G09190	Oryza nivara	ONIVA03G09190	I
ONIVA03G35990	Oryza nivara	ONIVA03G35990	I
ONIVA04G21940	Oryza nivara	ONIVA04G21940	I
ONIVA06G05400	Oryza nivara	ONIVA06G05400	I
ONIVA08G24560	Oryza nivara	ONIVA08G24560	I
ONIVA09G16870	Oryza nivara	ONIVA09G16870	I
OPUNC02G25740	Oryza punctata	OPUNC02G25740	I
OPUNC03G08100	Oryza punctata	OPUNC03G08100	I
OPUNC03G31610	Oryza punctata	OPUNC03G31610	I
OPUNC04G20380	Oryza punctata	OPUNC04G20380	I
OPUNC06G04000	Oryza punctata	OPUNC06G04000	I
OPUNC08G19670	Oryza punctata	OPUNC08G19670	I
ORGLA02G0240800	Oryza glaberrima	ORGLA02G0240800	I
ORGLA03G0081100	Oryza glaberrima	ORGLA03G0081100	I
ORGLA04G0197900	Oryza glaberrima	ORGLA04G0197900	I
ORGLA06G0038600	Oryza glaberrima	ORGLA06G0038600	I
ORGLA08G0230000	Oryza glaberrima	ORGLA08G0230000	I
ORGLA09G0121900	Oryza glaberrima	ORGLA09G0121900	I
ORUFI02G29550	Oryza rufipogon	ORUFI02G29550	I
ORUFI03G08410	Oryza rufipogon	ORUFI03G08410	I
ORUFI03G35940	Oryza rufipogon	ORUFI03G35940	I
ORUFI04G24470	Oryza rufipogon	ORUFI04G24470	I
ORUFI06G04180	Oryza rufipogon	ORUFI06G04180	I
ORUFI08G24040	Oryza rufipogon	ORUFI08G24040	I
ORUFI09G17010	Oryza rufipogon	ORUFI09G17010	I
MADS34	Oryza sativa	OS03G0753100	I
OS04G0580700	Oryza sativa	OS04G0580700	I
PGSC0003DMG400000136	Solanum tuberosum	PGSC0003DMG400000136	I
PGSC0003DMG400001377	Solanum tuberosum	PGSC0003DMG400001377	I
PGSC0003DMG400001938	Solanum tuberosum	PGSC0003DMG400001938	I
PGSC0003DMG400021899	Solanum tuberosum	PGSC0003DMG400021899	I
PGSC0003DMG400024626	Solanum tuberosum	PGSC0003DMG400024626	I
PGSC0003DMG400028359	Solanum tuberosum	PGSC0003DMG400028359	I
POPTR_0003s16800	Populus trichocarpa	POPTR_0003s16800	I
POPTR_0004s11450	Populus trichocarpa	POPTR_0004s11450	I
POPTR_0008s09780	Populus trichocarpa	POPTR_0008s09780	I
POPTR_0015s14010	Populus trichocarpa	POPTR_0015s14010	I
PRUPE_ppa010391mg	Prunus persica	PRUPE_ppa010391mg	I
PRUPE_ppa010548mg	Prunus persica	PRUPE_ppa010548mg	I
PRUPE_ppa010679mg	Prunus persica	PRUPE_ppa010679mg	I
PRUPE_ppa019932mg	Prunus persica	PRUPE_ppa019932mg	I
PRUPE_ppa1027139mg	Prunus persica	PRUPE_ppa1027139mg	I
Sb01g007780	Sorghum bicolor	Sb01g007780	I
Sb01g042840	Sorghum bicolor	Sb01g042840	I
Sb02g029310	Sorghum bicolor	Sb02g029310	I
Sb04g031750	Sorghum bicolor	Sb04g031750	I
Sb07g026200	Sorghum bicolor	Sb07g026200	I
Sb10g004390	Sorghum bicolor	Sb10g004390	I
SEP1	Arabidopsis lyrata	scaffold_601612.1	I
Si007226m.g	Setaria italica	Si007226m.g	I
Si013937m.g	Setaria italica	Si013937m.g	I
Si018160m.g	Setaria italica	Si018160m.g	I
Si030960m.g	Setaria italica	Si030960m.g	I
Solyc03g114840.2	Solanum lycopersicum	Solyc03g114840.2	I
Solyc04g005320.2	Solanum lycopersicum	Solyc04g005320.2	I
Solyc05g015750.2	Solanum lycopersicum	Solyc05g015750.2	I
Solyc12g038510.1	Solanum lycopersicum	Solyc12g038510.1	I
TCM_005458	Theobroma cacao	TCM_005458	I
TCM_008703	Theobroma cacao	TCM_008703	I
TCM_011478	Theobroma cacao	TCM_011478	I
TCM_014337	Theobroma cacao	TCM_014337	I
TCM_018979	Theobroma cacao	TCM_018979	I
Traes_4AS_BE7BCEFEC	Triticum aestivum	Traes_4AS_BE7BCEFEC	I
Traes_4AS_E1E60C5E5	Triticum aestivum	Traes_4AS_E1E60C5E5	I
Traes_4BL_9A17EA3B7	Triticum aestivum	Traes_4BL_9A17EA3B7	I
Traes_4BS_59C6DEC88	Triticum aestivum	Traes_4BS_59C6DEC88	I
Traes_4DL_008F8BBFA	Triticum aestivum	Traes_4DL_008F8BBFA	I
Traes_4DL_964466BEC	Triticum aestivum	Traes_4DL_964466BEC	I
Traes_5AL_01329A110	Triticum aestivum	Traes_5AL_01329A110	I
Traes_5BL_4CA71C036	Triticum aestivum	Traes_5BL_4CA71C036	I
Traes_5BL_9627436AE	Triticum aestivum	Traes_5BL_9627436AE	I
Traes_6AL_1F7DAC5FA	Triticum aestivum	Traes_6AL_1F7DAC5FA	I
Traes_6BL_7C6B17284	Triticum aestivum	Traes_6BL_7C6B17284	I
Traes_6DL_5B1D4DBF5	Triticum aestivum	Traes_6DL_5B1D4DBF5	I
Traes_7AS_ADA694FCE	Triticum aestivum	Traes_7AS_ADA694FCE	I
Traes_7AS_C25A349A9	Triticum aestivum	Traes_7AS_C25A349A9	I
Traes_7BS_592EC3AB1	Triticum aestivum	Traes_7BS_592EC3AB1	I
Traes_7BS_F4CFCDF52	Triticum aestivum	Traes_7BS_F4CFCDF52	I
Traes_7DS_4AF5C695F	Triticum aestivum	Traes_7DS_4AF5C695F	I
Traes_7DS_68DE33D2A	Triticum aestivum	Traes_7DS_68DE33D2A	I
Traes_7DS_D435DF316	Triticum aestivum	Traes_7DS_D435DF316	I
TRIUR3_12423	Triticum urartu	TRIUR3_12423	I
TRIUR3_18949	Triticum urartu	TRIUR3_18949	I
TRIUR3_19009	Triticum urartu	TRIUR3_19009	I
TRIUR3_19039	Triticum urartu	TRIUR3_19039	I
TRIUR3_22246	Triticum urartu	TRIUR3_22246	I
TRIUR3_24374	Triticum urartu	TRIUR3_24374	I
TRIUR3_28216	Triticum urartu	TRIUR3_28216	I
TRIUR3_28280	Triticum urartu	TRIUR3_28280	I
TRIUR3_30491	Triticum urartu	TRIUR3_30491	I
SEP3	Vitis vinifera	VIT_01s0010g03900	I
SEP4	Vitis vinifera	VIT_01s0011g00110	I
VIT_14s0083g01050	Vitis vinifera	VIT_14s0083g01050	I
VIT_15s0048g01270	Vitis vinifera	VIT_15s0048g01270	I
VIT_16s0022g02330	Vitis vinifera	VIT_16s0022g02330	I
VIT_17s0000g05000	Vitis vinifera	VIT_17s0000g05000	I
Ca_08513	Cicer arietinum	Ca_08513	I
Ca_11363	Cicer arietinum	Ca_11363	I
Ca_13221	Cicer arietinum	Ca_13221	I
Ca_17431	Cicer arietinum	Ca_17431	I
Ca_20649	Cicer arietinum	Ca_20649	I
Ca_24651	Cicer arietinum	Ca_24651	I
Cla000706	Citrullus lanatus	Cla000706	I
Cla007056	Citrullus lanatus	Cla007056	I
Cla010990	Citrullus lanatus	Cla010990	I
Pm007034	Prunus mume	Pm007034	I
Pm015394	Prunus mume	Pm015394	I
Pm018087	Prunus mume	Pm018087	I
Pm025027	Prunus mume	Pm025027	I
30174.m008934	Ricinus communis	30174.m008934	I
cassava10843.m1	Manihot esculenta	cassava10843.m1	I
cassava2637.m1	Manihot esculenta	cassava2637.m1	I
cassava32526.m1	Manihot esculenta	cassava32526.m1	I
cassava39140.m1	Manihot esculenta	cassava39140.m1	I
cassava46264.m1	Manihot esculenta	cassava46264.m1	I
cassava8563.m1	Manihot esculenta	cassava8563.m1	I
cassava9951.m1	Manihot esculenta	cassava9951.m1	I
Cucsa.113420	Cucumis sativus	Cucsa.113420	I
Cucsa.174510	Cucumis sativus	Cucsa.174510	I
Cucsa.202790	Cucumis sativus	Cucsa.202790	I
Cucsa.349640	Cucumis sativus	Cucsa.349640	I
mgf001713m	Mimulus guttatus	mgf001713m	I
mgf004694m	Mimulus guttatus	mgf004694m	I
mgf007278m	Mimulus guttatus	mgf007278m	I
mgf009368m	Mimulus guttatus	mgf009368m	I
mgf010233m	Mimulus guttatus	mgf010233m	I
mgf011666m	Mimulus guttatus	mgf011666m	I
Aquca_002_00913	Aquilegia coerulea	Aquca_002_00913	I
Aquca_002_00916	Aquilegia coerulea	Aquca_002_00916	I
Aquca_006_00411	Aquilegia coerulea	Aquca_006_00411	I
Aquca_011_00121	Aquilegia coerulea	Aquca_011_00121	I
Bostr.15697s0055	Boechera stricta	Bostr.15697s0055	I
Bostr.25993s0209	Boechera stricta	Bostr.25993s0209	I
Bostr.2902s0314	Boechera stricta	Bostr.2902s0314	I
Cagra.0050s0135	Capsella grandiflora	Cagra.0050s0135	I
Cagra.6845s0024	Capsella grandiflora	Cagra.6845s0024	I
Cagra.8874s0001	Capsella grandiflora	Cagra.8874s0001	I
Carubv10001783m.g	Capsella rubella	Carubv10001783m.g	I
Carubv10010134m.g	Capsella rubella	Carubv10010134m.g	I
Carubv10023910m.g	Capsella rubella	Carubv10023910m.g	I
Ciclev10012593m.g	Citrus clementina	Ciclev10012593m.g	I
Ciclev10021357m.g	Citrus clementina	Ciclev10021357m.g	I
Ciclev10021911m.g	Citrus clementina	Ciclev10021911m.g	I
Ciclev10032507m.g	Citrus clementina	Ciclev10032507m.g	I
Ciclev10032572m.g	Citrus clementina	Ciclev10032572m.g	I
Eucgr.B00633	Eucalyptus grandis	Eucgr.B00633	I
Eucgr.B03516	Eucalyptus grandis	Eucgr.B03516	I
Eucgr.G02427	Eucalyptus grandis	Eucgr.G02427	I
Eucgr.H04617	Eucalyptus grandis	Eucgr.H04617	I
Eucgr.I02058	Eucalyptus grandis	Eucgr.I02058	I
Eucgr.K02546	Eucalyptus grandis	Eucgr.K02546	I
evm.TU.supercontig_14.222	Carica papaya	evm.TU.supercontig_14.222	I
evm.TU.supercontig_414.3	Carica papaya	evm.TU.supercontig_414.3	I
evm.TU.supercontig_43.78	Carica papaya	evm.TU.supercontig_43.78	I
evm.TU.supercontig_660.1	Carica papaya	evm.TU.supercontig_660.1	I
gene04229-v1.0-hybrid	Fragaria vesca	gene04229-v1.0-hybrid	I
gene04563-v1.0-hybrid	Fragaria vesca	gene04563-v1.0-hybrid	I
gene19428-v1.0-hybrid	Fragaria vesca	gene19428-v1.0-hybrid	I
Gorai.001G207300	Gossypium raimondii	Gorai.001G207300	I
Gorai.004G155700	Gossypium raimondii	Gorai.004G155700	I
Gorai.005G165000	Gossypium raimondii	Gorai.005G165000	I
Gorai.006G268400	Gossypium raimondii	Gorai.006G268400	I
Gorai.007G093700	Gossypium raimondii	Gorai.007G093700	I
Gorai.012G180300	Gossypium raimondii	Gorai.012G180300	I
Gorai.012G185600	Gossypium raimondii	Gorai.012G185600	I
Gorai.013G096000	Gossypium raimondii	Gorai.013G096000	I
Lus10003124.g	Linum usitatissimum	Lus10003124.g	I
Lus10003125.g	Linum usitatissimum	Lus10003125.g	I
Lus10004638.g	Linum usitatissimum	Lus10004638.g	I
Lus10005080.g	Linum usitatissimum	Lus10005080.g	I
Lus10011349.g	Linum usitatissimum	Lus10011349.g	I
Lus10015765.g	Linum usitatissimum	Lus10015765.g	I
Lus10017870.g	Linum usitatissimum	Lus10017870.g	I
Lus10026678.g	Linum usitatissimum	Lus10026678.g	I
Lus10034371.g	Linum usitatissimum	Lus10034371.g	I
Lus10034663.g	Linum usitatissimum	Lus10034663.g	I
Lus10037040.g	Linum usitatissimum	Lus10037040.g	I
MDP0000220008	Malus domestica	MDP0000220008	I
MDP0000289858	Malus domestica	MDP0000289858	I
MDP0000326390	Malus domestica	MDP0000326390	I
MDP0000370413	Malus domestica	MDP0000370413	I
MDP0000605482	Malus domestica	MDP0000605482	I
orange1.1g024640m.g	Citrus sinensis	orange1.1g024640m.g	I
orange1.1g026043m.g	Citrus sinensis	orange1.1g026043m.g	I
orange1.1g026143m.g	Citrus sinensis	orange1.1g026143m.g	I
orange1.1g037149m.g	Citrus sinensis	orange1.1g037149m.g	I
Pavir.Aa00924	Panicum virgatum	Pavir.Aa00924	I
Pavir.Ab02707	Panicum virgatum	Pavir.Ab02707	I
Pavir.Ba01535	Panicum virgatum	Pavir.Ba01535	I
Pavir.Ia04691	Panicum virgatum	Pavir.Ia04691	I
Pavir.Ib00756	Panicum virgatum	Pavir.Ib00756	I
Pavir.J10600	Panicum virgatum	Pavir.J10600	I
Pavir.J35684	Panicum virgatum	Pavir.J35684	I
SapurV1A.0173s0290	Salix purpurea	SapurV1A.0173s0290	I
SapurV1A.0176s0490	Salix purpurea	SapurV1A.0176s0490	I
SapurV1A.0323s0170	Salix purpurea	SapurV1A.0323s0170	I
SapurV1A.0400s0280	Salix purpurea	SapurV1A.0400s0280	I
SapurV1A.0578s0120	Salix purpurea	SapurV1A.0578s0120	I
SapurV1A.0731s0080	Salix purpurea	SapurV1A.0731s0080	I
SapurV1A.0881s0020	Salix purpurea	SapurV1A.0881s0020	I
SapurV1A.1460s0090	Salix purpurea	SapurV1A.1460s0090	I
Thhalv10008591m.g	Eutrema salsugineum	Thhalv10008591m.g	I
Thhalv10014493m.g	Eutrema salsugineum	Thhalv10014493m.g	I
PK08909.1	Cannabis sativa	PK08909.1	I
PK19420.1	Cannabis sativa	PK19420.1	I
PK21769.1	Cannabis sativa	PK21769.1	I
chr2.CM0338.160.nc	Lotus japonicus	chr2.CM0338.160.nc	I
chr4.CM0044.10.nc	Lotus japonicus	chr4.CM0044.10.nc	I
LjSGA_058229.2	Lotus japonicus	LjSGA_058229.2	I
LjT13A22.130.nc	Lotus japonicus	LjT13A22.130.nc	I
PDK_20s1538871g001	Phoenix dactylifera	PDK_20s1538871g001	I

sox4a (Danio rerio) Sox

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

2092 Related TFs

sox4a **(Danio rerio)
Sox**