HMG20A (Echinops telfairi)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSETEG00000015812 T327994_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.563 0.710
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000012823 Sox 103 171

Links

Other Sox family TFs
Other Echinops telfairi TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ces-2 Caenorhabditis elegans WBGene00000469 D 0.000
nOo.2.0.1.g09202 Onchocerca ochengi nOo.2.0.1.g09202 I 0.000
WUBG_01294 Wuchereria bancrofti WUBG_01294 I 0.000
L596_g3194 Steinernema carpocapsae L596_g3194 I 0.000
L889_g9945 Steinernema feltiae L889_g9945 I 0.000
L893_g26459 Steinernema glaseri L893_g26459 I 0.000
L898_g30246 Steinernema monticolum L898_g30246 I 0.000
nAv.1.0.1.g06570 Acanthocheilonema viteae nAv.1.0.1.g06570 I 0.000
nDi.2.2.2.g01315 Dirofilaria immitis nDi.2.2.2.g01315 I 0.000
nDi.2.2.2.g10294 Dirofilaria immitis nDi.2.2.2.g10294 I 0.000
nLs.2.1.2.g06633 Litomosoides sigmodontis nLs.2.1.2.g06633 I 0.000
HPLM_0000323401 Haemonchus placei HPLM_0000323401 I 0.000
OFLC_0001455401 Onchocerca flexuosa OFLC_0001455401 I 0.000
PEQ_0001019701 Parascaris equorum PEQ_0001019701 I 0.000
PTRK_0001316500 Parastrongyloides trichosuri PTRK_0001316500 I 0.000
SMUV_0001027601 Syphacia muris SMUV_0001027601 I 0.000
SPAL_0001536200 Strongyloides papillosus SPAL_0001536200 I 0.000
SSTP_0000025200 Strongyloides stercoralis SSTP_0000025200 I 0.000
SVE_0152400 Strongyloides venezuelensis SVE_0152400 I 0.000
ALUE_0000326401 Ascaris lumbricoides ALUE_0000326401 I 0.000
Bm7588 Brugia malayi Bm7588 I 0.000
CBG19808 Caenorhabditis briggsae CBG19808 I 0.000
CBN32559 Caenorhabditis brenneri CBN32559 I 0.000
CJA10655 Caenorhabditis japonica CJA10655 I 0.000
CRE13954 Caenorhabditis remanei CRE13954 I 0.000
LOAG_04491 Loa loa LOAG_04491 I 0.000
WBGene00237430 Onchocerca volvulus WBGene00237430 I 0.000
BGLB009720 Biomphalaria glabrata BGLB009720 I 0.000
EEL_0000071901 Elaeophora elaphi EEL_0000071901 I 0.000
ASIM_0001335601 Anisakis simplex ASIM_0001335601 I 0.000
ASU_05094 Ascaris suum ASU_05094 I 0.000
BTMF_0000617301 Brugia timori BTMF_0000617301 I 0.000
DICVIV_06567 Dictyocaulus viviparus DICVIV_06567 I 0.000
DME_0000215901 Dracunculus medinensis DME_0000215901 I 0.000
ANCCAN_03591 Ancylostoma caninum ANCCAN_03591 N 0.000
NECAME_03378 Necator americanus NECAME_03378 N 0.000
ACOC_0000564301 Angiostrongylus costaricensis ACOC_0000564301 N 0.000
ANCCEY_10263 Ancylostoma ceylanicum ANCCEY_10263 N 0.000
L892_g28108 Steinernema scapterisci L892_g28108 N 0.000
L596_g21771 Steinernema carpocapsae L596_g21771 N 0.000