CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMG20B
(
Felis catus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSFCAG00000026167
T328048_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN
NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.714
0.957
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000021031
Sox
70
138
PKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEREKQQYMKELRAYQ
Links
Other
Sox
family TFs
Other
Felis catus
TFs
170 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O9_02970
Exophiala aquamarina
A1O9_02970
N
0.000
F503_06317
Ophiostoma piceae uamh
F503_06317
N
0.000
FFUJ_01109
Fusarium fujikuroi
FFUJ_01109
N
0.000
FVEG_01050
Fusarium verticillioides
FVEG_01050
N
0.000
PV06_00042
Exophiala oligosperma
PV06_00042
N
0.000
PV08_04487
Exophiala spinifera
PV08_04487
N
0.000