hmg20b (Oryzias latipes)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSORLG00000004640 T328766_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.653 0.768
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000005836 Sox 47 115
ENSORLP00000005838 Sox 47 115

Links

Other Sox family TFs
Other Oryzias latipes TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SINV25428 Solenopsis invicta SINV25428 I