Hmg20a (Rattus norvegicus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSRNOG00000016905 T329040_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.563 0.696
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000022976 Sox 103 171

Links

Other Sox family TFs
Other Rattus norvegicus TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMPREF1120_07748 Exophiala dermatitidis HMPREF1120_07748 N 0.000
Pc21g06560 Penicillium chrysogenum Pc21g06560 N 0.000
Pc14g01370 Penicillium chrysogenum Pc14g01370 N 0.000
Z519_00518 Cladophialophora bantiana Z519_00518 N 0.000
Z518_05059 Rhinocladiella mackenziei Z518_05059 N 0.000
PV11_10054 Exophiala sideris PV11_10054 N 0.000
PV10_03009 Exophiala mesophila PV10_03009 N 0.000
PV06_10331 Exophiala oligosperma PV06_10331 N 0.000
PV06_06048 Exophiala oligosperma PV06_06048 N 0.000
PV05_11665 Exophiala xenobiotica PV05_11665 N 0.000
PV05_10000 Exophiala xenobiotica PV05_10000 N 0.000
PV04_00511 Capronia semiimmersa PV04_00511 N 0.000
PDE_02517 Penicillium oxalicum PDE_02517 N 0.000
PCH_Pc21g06560 Penicillium rubens PCH_Pc21g06560 N 0.000
PCH_Pc14g01370 Penicillium rubens PCH_Pc14g01370 N 0.000
PAAG_00881 Paracoccidioides sp lutzii PAAG_00881 N 0.000
A1O1_01367 Capronia coronata A1O1_01367 N 0.000
HMPREF1120_05306 Exophiala dermatitidis HMPREF1120_05306 N 0.000
G647_08938 Cladophialophora carrionii G647_08938 N 0.000
G647_01519 Cladophialophora carrionii G647_01519 N 0.000
FFUJ_11321 Fusarium fujikuroi FFUJ_11321 N 0.000
DOTSEDRAFT_75032 Dothistroma septosporum DOTSEDRAFT_75032 N 0.000
ANIA_05775 Aspergillus nidulans CADANIAG00003279 N 0.000
CADAFLAG00008683 Aspergillus flavus CADAFLAG00008683 N 0.000
BAUCODRAFT_39585 Baudoinia compniacensis BAUCODRAFT_39585 N 0.000
A1O7_02428 Cladophialophora yegresii A1O7_02428 N 0.000
A1O7_01450 Cladophialophora yegresii A1O7_01450 N 0.000
A1O5_00510 Cladophialophora psammophila A1O5_00510 N 0.000
A1O3_09130 Capronia epimyces A1O3_09130 N 0.000
A1O3_04485 Capronia epimyces A1O3_04485 N 0.000
A1O1_07238 Capronia coronata A1O1_07238 N 0.000
A1O1_05514 Capronia coronata A1O1_05514 N 0.000