CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh_scip_prom.28083.11892
(
Phytophthora lateralis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
fgenesh_scip_prom.28083.11892
T329867_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.11892
Sox
4
71
VKRPLSSYMHFCNERRRQVMDENPGVRIGQIQKVISTQWKALTPEQKEVYVQIAAKDKVRYEEELLDN
Links
Other
Sox
family TFs
Other
Phytophthora lateralis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BZIP4
Arabidopsis thaliana
AT1G59530
D
ATBZIP4
Arabidopsis lyrata
fgenesh2_kg.2__488__AT1G59530.1
I
Bostr.10040s0294
Boechera stricta
Bostr.10040s0294
I
Cagra.1418s0004
Capsella grandiflora
Cagra.1418s0004
I
Thhalv10023854m.g
Eutrema salsugineum
Thhalv10023854m.g
I
Bo9g048720
Brassica oleracea
Bo9g048720
N
Bra027855
Brassica rapa
Bra027855
N