GB43462 (Apis mellifera)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GB43462 T329996_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Cic
M00195_2.00 		Mus musculus
NNTGCTGABN
NVTCAGCANN		 PBM
Badis et al.(2009)
Cic_3454 		0.734 0.942
cic
M06452_2.00 		Drosophila melanogaster
YYCATTSA
TSAATGRR		 B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386 		0.687 0.797
gei-3
M00711_2.00 		Caenorhabditis elegans
NWNWMWDN
NHWKWNWN		 PBM
Narasimhan et al.(2015)
pTH10038 		0.678 0.768
BBX
M05763_2.00 		Homo sapiens
TGAWCDNYGWTCA
TGAWCRNHGWTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX 		0.468 0.580
BBX
M05764_2.00 		Homo sapiens
TGAACDNYGTTCA
TGAACRNHGTTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX 		0.468 0.580
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.440 0.348
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.440 0.348
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.440 0.348
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.440 0.348
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.440 0.348
bbx
M03975_2.00 		Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN		 SELEX
Nitta et al.(2015)
bbx_1 		0.440 0.522
Bbx
M00196_2.00 		Mus musculus
TTCATTGA
TCAATGAA		 PBM
Badis et al.(2009)
Bbx_3753 		0.434 0.565
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB43462-PA Sox 1130 1198

Links

Other Sox family TFs
Other Apis mellifera TFs

477 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HLX Echinops telfairi ENSETEG00000003298 I 0.000
ENSTNIG00000018605 Tetraodon nigroviridis ENSTNIG00000018605 I 0.000
MICALL2 Takifugu rubripes ENSTRUG00000013527 I 0.000
HLX Sorex araneus ENSSARG00000009476 I 0.000
ENSMEUG00000003167 Macropus eugenii ENSMEUG00000003167 I 0.000
ENSDORG00000013256 Dipodomys ordii ENSDORG00000013256 I 0.000
e_gw.5.534.1 Branchiostoma floridae e_gw.5.534.1 I 0.000
e_gw.5.535.1 Branchiostoma floridae e_gw.5.535.1 I 0.000
AFAF010529 Anopheles farauti AFAF010529 N 0.000
ASTEI06400 Anopheles stephensi ASTEI06400 N 0.000
AFAF016470 Anopheles farauti AFAF016470 N 0.000
AFUN006141 Anopheles funestus AFUN006141 N 0.000
AFUN006142 Anopheles funestus AFUN006142 N 0.000
AEPI004567 Anopheles epiroticus AEPI004567 N 0.000
AMEC014801 Anopheles melas AMEC014801 N 0.000
ADIR007401 Anopheles dirus ADIR007401 N 0.000
AMIN011034 Anopheles minimus AMIN011034 N 0.000
ACUA018681 Anopheles culicifacies ACUA018681 N 0.000
AARA005693 Anopheles arabiensis AARA005693 N 0.000
AQUA011153 Anopheles quadriannulatus AQUA011153 N 0.000
Ocbimv22038272m.g Octopus bimaculoides Ocbimv22038272m.g N 0.000
BGLB001079 Biomphalaria glabrata BGLB001079 N 0.000
PPAI003680 Phlebotomus papatasi PPAI003680 N 0.000
csin111071 Clonorchis sinensis csin111071 N 0.000
SBAD_0000059701 Soboliphyme baturini SBAD_0000059701 N 0.000
SCUD_0000356901 Schistosoma curassoni SCUD_0000356901 N 0.000
SPER_0000200201 Spirometra erinaceieuropaei SPER_0000200201 N 0.000
SSLN_0001900001 Schistocephalus solidus SSLN_0001900001 N 0.000
T265_04102 Opisthorchis viverrini T265_04102 N 0.000
TRE_0001634301 Trichobilharzia regenti TRE_0001634301 N 0.000
TRE_0001854501 Trichobilharzia regenti TRE_0001854501 N 0.000
TTAC_0001113501 Hydatigera taeniaeformis TTAC_0001113501 N 0.000
ENSTBEG00000005783 Tupaia belangeri ENSTBEG00000005783 N 0.000
ACEP16435 Atta cephalotes ACEP16435 N 0.000
BGIBMGA011355 Bombyx mori BGIBMGA011355 N 0.000
CPIJ016099 Culex quinquefasciatus CPIJ016099 N 0.000
ENSACAG00000002042 Anolis carolinensis ENSACAG00000002042 N 0.000
ENSAPLG00000006374 Anas platyrhynchos ENSAPLG00000006374 N 0.000
DBX1 Canis familiaris ENSCAFG00000009813 N 0.000
ENSEEUG00000014300 Erinaceus europaeus ENSEEUG00000014300 N 0.000
ENSFALG00000012045 Ficedula albicollis ENSFALG00000012045 N 0.000
ENSGALG00000027554 Gallus gallus ENSGALG00000027554 N 0.000
ENSGMOG00000002488 Gadus morhua ENSGMOG00000002488 N 0.000
ENSOPRG00000015148 Ochotona princeps ENSOPRG00000015148 N 0.000
AALB004801 Anopheles albimanus AALB004801 N 0.000
ENSTGUG00000002708 Taeniopygia guttata ENSTGUG00000002708 N 0.000
L798_10069 Zootermopsis nevadensis L798_10069 N 0.000
MCINX013655 Melitaea cinxia MCINX013655 N 0.000
RPRC011993 Rhodnius prolixus RPRC011993 N 0.000
SINV13310 Solenopsis invicta SINV13310 N 0.000
Aan_R009659 Calypte anna Aan_R009659 N 0.000
Gfo_R010904 Geospiza fortis Gfo_R010904 N 0.000
CpipJ_CPIJ016099 Culex pipiens CpipJ_CPIJ016099 N 0.000
CLEC012266 Cimex lectularius CLEC012266 N 0.000
LCUP015731 Lucilia cuprina LCUP015731 N 0.000
LDEC001875 Leptinotarsa decemlineata LDEC001875 N 0.000