CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_249306
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_249306
T330063_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA02683
Sox
118
166
LKKPKNPYLCFAKANRDEFRIKYPDALSREITSLLGKAWKELSDEEKKG
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EHI_042690
Entamoeba histolytica
EHI_042690
N
0.460
EDI_085740
Entamoeba dispar
EDI_085740
N
0.467
LjSGA_040316.1
Lotus japonicus
LjSGA_040316.1
N
0.437