CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_27015
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_27015
T330072_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA12548
Sox
22
80
KRKSPNGFALYFKMDRSKLKEKFPNYSPQEIMKEAGRSWKKLPQTLRNSFTMYAMNDSS
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MBR_08936
Metarhizium brunneum
MBR_08936
N
fgenesh1_pm.sca_55_chr13_4_0000015
Nectria haematococca
fgenesh1_pm.sca_55_chr13_4_0000015
N
X797_009365
Metarhizium robertsii
X797_009365
N
VDBG_09780
Verticillium alfalfae
VDBG_09780
N
VDAG_09513
Verticillium dahliae
VDAG_09513
N
TRIVIDRAFT_198099
Trichoderma virens
TRIVIDRAFT_198099
N
TRIREDRAFT_62432
Trichoderma reesei
TRIREDRAFT_62432
N
TRIATDRAFT_42001
Trichoderma atroviride
TRIATDRAFT_42001
N
SMAC_03574
Sordaria macrospora
SMAC_03574
N
S40288_08767
Stachybotrys chartarum
S40288_08767
N
S40285_07036
Stachybotrys chlorohalonata
S40285_07036
N
PODANS_5_10990
Podospora anserina
PODANS_5_10990
N
PFICI_03482
Pestalotiopsis fici
PFICI_03482
N
NechaG97941
Fusarium solani
NechaG97941
N
MYCTH_2066181
Myceliophthora thermophila
MYCTH_2066181
N
MGU_09069
Metarhizium guizhouense
MGU_09069
N
VDBG_09780
Verticillium albo atrum
VDBG_09780
N
MAPG_03648
Magnaporthe poae
MAPG_03648
N
MANI_021779
Metarhizium anisopliae
MANI_021779
N
MAM_04529
Metarhizium album
MAM_04529
N
MAJ_09874
Metarhizium majus
MAJ_09874
N
MAC_09219
Metarhizium acridum
MAC_09219
N
GLRG_01759
Colletotrichum graminicola
GLRG_01759
N
GGTG_05279
Gaeumannomyces graminis
GGTG_05279
N
FPSE_04461
Fusarium pseudograminearum
FPSE_04461
N
FGRRES_07924
Fusarium graminearum
FGRRES_07924
N
CTHT_0049560
Chaetomium thermophilum
CTHT_0049560
N
Cob_00031
Colletotrichum orbiculare
Cob_00031
N
CHGG_00255
Chaetomium globosum
CHGG_00255
N
CH063_14085
Colletotrichum higginsianum
CH063_14085
N
CGGC5_9846
Colletotrichum gloeosporioides
CGGC5_9846
N
CFIO01_01718
Colletotrichum fioriniae
CFIO01_01718
N